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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
88
accessible chromatin
80
candidate regulatory elements
78
target gene predictions
48
chromatin state
binding sites
25
histone modifications
15
variant allelic effects
11
eQTL
6
Fine-mapped variants
2
gene expression
2
pQTL
1
caQTL
Date released
120
September, 2022
67
February, 2021
50
November, 2021
20
June, 2020
16
February, 2024
13
May, 2021
9
January, 2020
9
March, 2020
9
May, 2020
8
August, 2021
7
August, 2017
7
November, 2022
3
April, 2020
3
May, 2022
2
February, 2020
2
January, 2021
2
November, 2020
2
October, 2019
2
September, 2018
2
September, 2023
1
June, 2021
1
October, 2022
Available data
298
bed bed3+
55
bigWig
41
bed bed9
8
tsv
2
bigBed bed9
1
bigBed narrowPeak
Organism
356
Homo sapiens
Biosample type
214
primary cell
71
tissue
45
in vitro differentiated cells
25
cell line
1
stem cell
Organ
557
epithelium
407
brain
380
kidney
360
musculature of body
356
connective tissue
300
lung
277
intestine
235
limb
224
heart
192
embryo
183
vasculature
181
pancreas
181
skin of body
171
bodily fluid
164
large intestine
161
blood
143
blood vessel
142
extraembryonic component
116
stomach
112
liver
101
eye
83
small intestine
77
bone element
76
uterus
75
mammary gland
71
adrenal gland
69
placenta
68
prostate gland
67
adipose tissue
64
ureter
57
penis
54
artery
50
lymph node
48
thymus
42
gonad
40
esophagus
39
spinal cord
31
spleen
23
lymphoid tissue
22
nerve
21
ovary
21
thyroid gland
20
testis
18
skeleton
18
vein
17
mouth
14
bronchus
14
lymphatic vessel
11
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
4
nose
3
trachea
Project
297
AMP
50
ENCODE
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
356
hg19
122
GRCh38
2
hg18
annotation_type!
binding sites
BIOSAMPLE
TYPE
356 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
gene expression
pQTL
caQTL
primary cell
fibroblast
16
4
6
pericyte cell
10
1
10
1
fibroblast of lung
6
4
4
fibroblast of cardiac tissue
2
3
4
3
foreskin fibroblast
1
6
2
1
2
+ See 32 more…
tissue
adipose tissue
2
7
8
6
1
3
omental fat pad
2
5
2
2
1
3
subcutaneous adipose tissue
2
2
1
1
4
3
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 4 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
mesenchymal stem cell
1
3
3
2
1
chondrocyte
5
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
+ See 7 more…
cell line
GM23248
1
2
1
1
1
HT1080
2
1
1
fibroblast of cardiac tissue
2
2
foreskin fibroblast
1
1
1
adipose tissue derived mesenchymal stem cell
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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