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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
208
accessible chromatin
122
target gene predictions
100
candidate regulatory elements
53
chromatin state
43
binding sites
38
variant allelic effects
28
histone modifications
10
gene expression
3
eQTL
2
caQTL
Date released
148
September, 2022
127
November, 2021
111
February, 2021
70
February, 2024
24
June, 2020
20
January, 2021
17
May, 2021
15
November, 2022
14
January, 2020
12
May, 2020
11
August, 2021
11
February, 2023
7
April, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2020
2
May, 2022
1
February, 2020
1
November, 2019
Available data
547
bed bed3+
176
bigWig
50
bed bed9
14
bigBed narrowPeak
9
tsv
3
bam
bed gappedPeak
3
xls
2
bigBed bed9
Organism
607
Homo sapiens
Biosample type
498
primary cell
59
tissue
32
cell line
18
in vitro differentiated cells
Organ
607
epithelium
440
brain
394
connective tissue
388
kidney
368
musculature of body
310
lung
286
intestine
239
limb
234
heart
217
bodily fluid
214
vasculature
206
blood
205
embryo
202
skin of body
187
pancreas
172
large intestine
169
blood vessel
146
extraembryonic component
134
liver
117
stomach
108
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adipose tissue
72
adrenal gland
65
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
21
vein
18
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
453
AMP
127
ENCODE
20
T1D
7
LungMap
Genome assembly (visualization)
597
hg19
234
GRCh38
files.file_type!
bed gappedPeak
BIOSAMPLE
TYPE
607 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
binding sites
variant allelic effects
histone modifications
gene expression
eQTL
caQTL
primary cell
endothelial cell
15
7
2
2
1
1
1
2
hepatocyte
8
3
1
1
1
2
4
5
endothelial cell of umbilical vein
2
4
6
5
2
foreskin keratinocyte
4
11
4
keratinocyte
2
5
3
3
1
1
2
+ See 94 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 13 more…
cell line
EndoC_BH1
8
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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