Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
59
accessible chromatin
18
candidate regulatory elements
9
chromatin state
9
target gene predictions
6
binding sites
4
histone modifications
2
variant allelic effects
1
eQTL
Date released
27
September, 2022
24
February, 2023
22
November, 2022
17
February, 2021
6
June, 2020
4
November, 2021
2
January, 2020
2
May, 2020
2
October, 2022
1
February, 2020
1
February, 2024
Available data
98
bed bed3+
36
bigWig
9
bed bed9
1
tsv
Organism
108
Homo sapiens
Biosample type
69
tissue
23
primary cell
10
cell line
6
in vitro differentiated cells
Organ
610
epithelium
440
brain
394
connective tissue
388
kidney
368
musculature of body
310
lung
286
intestine
239
limb
234
heart
217
bodily fluid
214
vasculature
206
blood
205
embryo
202
skin of body
190
pancreas
172
large intestine
169
blood vessel
146
extraembryonic component
134
liver
117
stomach
108
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adipose tissue
72
adrenal gland
65
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
21
vein
18
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
104
AMP
4
ENCODE
Genome assembly (visualization)
107
hg19
16
GRCh38
BIOSAMPLE
TYPE
108 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
chromatin state
target gene predictions
binding sites
histone modifications
variant allelic effects
eQTL
tissue
retina
23
6
3
3
1
1
1
1
pigmented layer of retina
20
eye
1
4
2
2
corneal epithelium
1
primary cell
retinal pigment epithelial cell
3
2
1
1
2
1
iris pigment epithelial cell
1
2
1
1
fibroblast of the conjunctiva
2
1
1
Muller cell
2
retinal pigment epithelial cell
1
+ See 1 more…
cell line
WERI-Rb-1
1
2
1
1
2
1
fibroblast of the conjunctiva
1
retinal cell
1
in vitro differentiated cells
retinal pigment epithelial cell
6
See all biosamples
Download