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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
176
candidate regulatory elements
85
chromatin state
85
target gene predictions
50
accessible chromatin
11
variant allelic effects
10
binding sites
7
histone modifications
3
eQTL
Date released
249
September, 2022
107
February, 2021
18
June, 2020
16
August, 2021
14
January, 2020
14
May, 2020
3
October, 2022
1
April, 2019
1
February, 2020
1
February, 2024
1
March, 2020
1
May, 2019
1
May, 2021
Available data
341
bed bed3+
85
bed bed9
33
bigWig
2
bigBed bed9
Organism
427
Homo sapiens
Biosample type
322
tissue
59
primary cell
45
cell line
1
in vitro differentiated cells
Organ
446
epithelium
423
brain
384
kidney
356
musculature of body
328
connective tissue
297
lung
264
intestine
237
limb
219
heart
217
bodily fluid
206
blood
203
embryo
195
vasculature
189
skin of body
164
large intestine
154
blood vessel
148
pancreas
142
extraembryonic component
119
liver
107
stomach
103
eye
82
bone element
81
mammary gland
79
small intestine
78
uterus
76
prostate gland
70
placenta
69
adipose tissue
64
penis
64
ureter
62
lymph node
61
adrenal gland
60
artery
48
thymus
43
gonad
41
spinal cord
36
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
vein
19
ovary
19
thyroid gland
18
skeleton
17
mouth
13
bronchus
12
lymphatic vessel
11
breast
11
pituitary gland
10
bone marrow
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
427
AMP
5
ENCODE
Genome assembly (visualization)
427
hg19
113
GRCh38
BIOSAMPLE
TYPE
427 results
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Clear Filters
candidate regulatory elements
chromatin state
target gene predictions
accessible chromatin
variant allelic effects
binding sites
histone modifications
eQTL
tissue
kidney
29
16
14
10
1
1
2
1
right kidney
20
10
10
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
left kidney
18
9
9
+ See 14 more…
primary cell
kidney tubule cell
3
2
2
2
epithelial cell of proximal tubule
2
1
1
1
1
1
renal cortical epithelial cell
2
1
1
2
1
glomerular endothelial cell
2
1
1
1
1
glomerular visceral epithelial cell
2
1
1
2
+ See 11 more…
cell line
HEK293
3
1
1
1
2
1
NT2-D1 cell
1
1
1
1
2
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
+ See 6 more…
in vitro differentiated cells
renal cell carcinoma
1
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