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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1354
target gene predictions
976
histone modifications
816
binding sites
377
accessible chromatin
120
variant allelic effects
40
chromatin state
10
eQTL
6
caQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2395
February, 2021
1674
September, 2022
288
June, 2020
272
May, 2021
266
February, 2024
111
November, 2021
99
October, 2022
82
May, 2020
45
March, 2020
34
August, 2017
31
August, 2021
30
November, 2022
28
January, 2021
8
May, 2022
7
February, 2023
5
September, 2023
1
April, 2019
1
August, 2020
1
August, 2022
1
January, 2020
1
January, 2022
1
November, 2019
Available data
5915
bed bed3+
869
bed bed9
bigWig
96
tsv
40
bigBed bed9
34
bed bed9+
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5380
Homo sapiens
Biosample type
2120
cell line
1731
tissue
1190
primary cell
335
in vitro differentiated cells
4
stem cell
Organ
381
epithelium
288
brain
274
connective tissue
274
kidney
265
musculature of body
230
lung
217
intestine
190
bodily fluid
181
blood
176
embryo
161
limb
160
skin of body
150
heart
134
large intestine
134
vasculature
109
extraembryonic component
104
pancreas
102
blood vessel
88
stomach
86
liver
75
uterus
70
mammary gland
63
prostate gland
62
eye
62
small intestine
60
bone element
54
lymph node
54
penis
54
placenta
51
adrenal gland
48
ureter
44
adipose tissue
37
thymus
36
artery
36
gonad
31
esophagus
29
spinal cord
25
spleen
19
testis
18
lymphoid tissue
16
ovary
16
thyroid gland
16
vein
13
mouth
12
bronchus
12
nerve
11
lymphatic vessel
11
pituitary gland
9
bone marrow
9
breast
7
skeleton
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5240
AMP
111
ENCODE
30
T1D
1
ITG
Genome assembly (visualization)
5382
hg19
429
GRCh38
1
hg18
files.file_type!
bigWig
BIOSAMPLE
TYPE
5382 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
eQTL
caQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
1
H1-hESC
1
39
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
+ See 760 more…
tissue
stomach
40
21
1
3
heart
37
20
1
1
2
2
brain
29
16
3
1
1
1
lung
33
17
muscle of arm
33
16
1
+ See 198 more…
primary cell
monocyte
2
86
1
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
common myeloid progenitor, CD34-positive
27
14
CD14-positive monocyte
8
19
B cell
14
10
+ See 275 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
3
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 99 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
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