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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1354
target gene predictions
976
histone modifications
816
binding sites
377
accessible chromatin
120
variant allelic effects
75
chromatin state
72
Fine-mapped variants
63
eQTL
12
gene expression
6
caQTL
5
hQTL
3
meQTL
3
pQTL
3
sQTL
2
variant to gene
1
other
Date released
2398
February, 2021
1674
September, 2022
288
June, 2020
280
May, 2021
278
February, 2024
117
March, 2020
111
November, 2021
99
October, 2022
82
May, 2020
54
August, 2021
42
May, 2022
35
August, 2017
30
November, 2022
28
January, 2021
25
February, 2020
7
February, 2023
5
September, 2023
1
April, 2019
1
August, 2020
1
August, 2022
1
January, 2020
1
January, 2022
November, 2019
Available data
5902
bed bed3+
bed bed9
bigWig
96
tsv
39
bigBed bed9
34
bed bed9+
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5556
Homo sapiens
Biosample type
2127
cell line
1854
tissue
1238
primary cell
335
in vitro differentiated cells
4
stem cell
Organ
383
epithelium
336
brain
291
connective tissue
280
musculature of body
275
kidney
230
lung
217
intestine
192
bodily fluid
183
blood
176
embryo
173
limb
162
heart
160
skin of body
146
vasculature
134
large intestine
116
pancreas
114
blood vessel
109
extraembryonic component
96
liver
88
stomach
75
uterus
70
mammary gland
63
prostate gland
62
eye
62
small intestine
61
bone element
56
adipose tissue
54
lymph node
54
penis
54
placenta
51
adrenal gland
48
ureter
44
artery
37
thymus
36
gonad
33
spinal cord
31
esophagus
25
spleen
19
testis
18
lymphoid tissue
16
nerve
16
ovary
16
thyroid gland
16
vein
13
mouth
12
bronchus
11
lymphatic vessel
11
pituitary gland
10
bone marrow
9
breast
7
skeleton
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5413
AMP
111
ENCODE
30
T1D
5
ITG
Genome assembly (visualization)
5559
hg19
627
GRCh38
4
hg18
files.file_type!
bigWig
bed bed9
month_released!
November, 2019
BIOSAMPLE
TYPE
5559 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
Fine-mapped variants
eQTL
gene expression
caQTL
hQTL
meQTL
pQTL
sQTL
variant to gene
other
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
1
H1-hESC
1
39
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
+ See 760 more…
tissue
stomach
40
21
1
3
heart
37
20
1
1
2
2
brain
29
16
3
1
1
1
lung
33
17
muscle of arm
33
16
1
+ See 206 more…
primary cell
monocyte
2
86
1
2
1
2
1
CD8-positive, alpha-beta T cell
7
5
30
1
common myeloid progenitor, CD34-positive
27
14
CD14-positive monocyte
8
19
B cell
14
10
+ See 279 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
3
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 99 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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