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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
124
accessible chromatin
53
target gene predictions
42
candidate regulatory elements
26
chromatin state
13
variant allelic effects
11
binding sites
10
eQTL
10
histone modifications
3
Fine-mapped variants
1
sQTL
Date released
71
September, 2022
42
February, 2021
24
February, 2023
23
February, 2024
22
November, 2021
22
November, 2022
20
January, 2021
15
May, 2021
10
June, 2020
8
August, 2021
8
May, 2020
7
March, 2020
6
October, 2019
5
January, 2020
3
August, 2017
2
November, 2019
2
October, 2022
1
April, 2019
1
February, 2020
1
June, 2021
Available data
257
bed bed3+
93
bigWig
22
bed bed9
14
bigBed narrowPeak
4
tsv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
293
Homo sapiens
Biosample type
159
tissue
95
primary cell
33
cell line
6
in vitro differentiated cells
Organ
600
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
205
embryo
204
vasculature
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
124
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
251
AMP
22
ENCODE
20
T1D
Genome assembly (visualization)
293
hg19
77
GRCh38
BIOSAMPLE
TYPE
293 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
variant allelic effects
binding sites
eQTL
histone modifications
Fine-mapped variants
sQTL
tissue
retina
23
3
6
3
1
1
1
islet of Langerhans
6
1
3
1
2
9
1
1
body of pancreas
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
pigmented layer of retina
20
+ See 10 more…
primary cell
pancreatic ductal cell
6
3
1
1
2
pancreatic beta cell
8
3
1
pancreatic alpha cell
7
3
1
pancreatic acinar cell
6
3
1
pancreatic delta cell
5
4
1
+ See 12 more…
cell line
EndoC_BH1
8
1
1
WERI-Rb-1
1
1
2
1
2
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 4 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
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