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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
164
candidate regulatory elements
103
target gene predictions
83
chromatin state
29
accessible chromatin
9
histone modifications
6
binding sites
5
variant allelic effects
Date released
233
September, 2022
100
February, 2021
28
November, 2021
13
June, 2020
8
February, 2024
8
May, 2021
5
August, 2017
3
March, 2020
1
October, 2022
Available data
321
bed bed3+
78
bed bed9
16
bigWig
Organism
399
Homo sapiens
Biosample type
331
tissue
34
cell line
34
primary cell
Organ
600
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
205
embryo
204
vasculature
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
124
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
371
AMP
28
ENCODE
Genome assembly (visualization)
399
hg19
112
GRCh38
BIOSAMPLE
TYPE
399 results
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candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
binding sites
variant allelic effects
tissue
stomach
40
21
19
3
1
small intestine
29
17
15
1
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
+ See 16 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
enterocyte
3
3
enteric smooth muscle cell
2
2
parietal cell
1
1
1
peptic cell
1
1
1
+ See 7 more…
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