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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
90
accessible chromatin
89
candidate regulatory elements
84
target gene predictions
53
chromatin state
31
binding sites
26
histone modifications
15
variant allelic effects
11
eQTL
6
Fine-mapped variants
2
gene expression
2
pQTL
1
caQTL
Date released
135
September, 2022
92
February, 2021
50
November, 2021
22
June, 2020
17
February, 2024
13
May, 2021
12
October, 2022
9
January, 2020
9
March, 2020
9
May, 2020
8
August, 2021
7
August, 2017
7
November, 2022
3
April, 2020
3
May, 2022
2
February, 2020
2
January, 2021
2
November, 2020
2
October, 2019
2
September, 2018
2
September, 2023
1
June, 2021
Available data
347
bed bed3+
55
bigWig
46
bed bed9
8
tsv
2
bigBed bed9
1
bigBed narrowPeak
Organism
410
Homo sapiens
Biosample type
235
primary cell
89
tissue
48
in vitro differentiated cells
37
cell line
1
stem cell
Organ
600
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
205
embryo
204
vasculature
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
124
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
351
AMP
50
ENCODE
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
410
hg19
128
GRCh38
2
hg18
BIOSAMPLE
TYPE
410 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
gene expression
pQTL
caQTL
primary cell
fibroblast
16
4
1
6
pericyte cell
10
1
10
1
fibroblast of lung
6
4
4
2
foreskin fibroblast
1
6
2
1
4
2
osteoblast
5
2
2
1
3
2
+ See 32 more…
tissue
adipose tissue
2
7
8
6
1
1
3
omental fat pad
2
5
2
2
1
3
Peyer's patch
1
7
3
3
subcutaneous adipose tissue
2
2
1
1
4
3
subcutaneous abdominal adipose tissue
5
1
+ See 6 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
cell line
GM23248
1
2
1
1
1
1
GM18507
1
1
2
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
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