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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
174
candidate regulatory elements
163
target gene predictions
104
chromatin state
59
histone modifications
57
accessible chromatin
39
Fine-mapped variants
29
binding sites
13
eQTL
12
variant allelic effects
Date released
270
September, 2022
165
February, 2021
51
February, 2024
42
March, 2020
32
June, 2020
20
January, 2020
16
May, 2021
15
May, 2020
13
February, 2020
7
August, 2017
7
October, 2022
4
May, 2019
3
September, 2023
2
November, 2019
2
November, 2021
1
January, 2022
Available data
501
bed bed3+
97
bed bed9
52
tsv
25
bigWig
7
bigBed bed9
Organism
649
Homo sapiens
Biosample type
364
tissue
196
cell line
57
primary cell
31
in vitro differentiated cells
2
stem cell
Organ
600
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
205
embryo
204
vasculature
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
124
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
648
AMP
2
ENCODE
Genome assembly (visualization)
650
hg19
243
GRCh38
BIOSAMPLE
TYPE
650 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
accessible chromatin
Fine-mapped variants
binding sites
eQTL
variant allelic effects
tissue
brain
29
16
18
3
2
1
1
tibial nerve
6
3
4
3
3
1
2
caudate nucleus
5
3
4
1
2
3
1
chorionic villus
8
4
4
layer of hippocampus
6
3
4
1
1
+ See 60 more…
cell line
H1-hESC
1
39
1
1
1
2
H9
7
8
1
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
+ See 28 more…
primary cell
trophoblast cell
7
5
4
1
1
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
cardiac fibroblast
3
2
+ See 8 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
+ See 4 more…
stem cell
H1-hESC
1
undifferentiated ESC (H9 cell line)
1
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