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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
109
candidate regulatory elements
66
target gene predictions
54
chromatin state
30
binding sites
23
accessible chromatin
18
histone modifications
4
variant allelic effects
3
Fine-mapped variants
1
eQTL
Date released
153
September, 2022
99
February, 2021
16
November, 2021
13
June, 2020
7
May, 2021
7
October, 2022
3
March, 2020
3
May, 2020
2
August, 2017
2
February, 2024
1
February, 2020
1
January, 2020
1
November, 2019
Available data
252
bed bed3+
52
bed bed9
10
bigWig
4
tsv
1
bigBed bed9
Organism
308
Homo sapiens
Biosample type
146
primary cell
106
cell line
44
tissue
12
in vitro differentiated cells
Organ
600
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
205
embryo
204
vasculature
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
124
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
292
AMP
16
ENCODE
Genome assembly (visualization)
308
hg19
78
GRCh38
BIOSAMPLE
TYPE
308 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
variant allelic effects
Fine-mapped variants
eQTL
primary cell
foreskin keratinocyte
11
4
4
keratinocyte
3
5
3
1
2
2
1
foreskin fibroblast
6
2
1
4
1
2
mammary gland epithelial cell
3
4
3
1
1
1
fibroblast of dermis
4
4
3
1
+ See 13 more…
cell line
MCF-7
9
6
5
3
1
2
GM23248
2
1
1
1
1
1
T47D
3
2
2
RPMI7951
2
1
1
1
SK-MEL-5
2
1
1
1
+ See 18 more…
tissue
tibial nerve
6
3
4
3
2
3
1
lower leg skin
6
2
2
skin of body
1
1
1
suprapubic skin
3
mammary gland
1
1
+ See 2 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
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