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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
191
candidate regulatory elements
89
chromatin state
88
target gene predictions
53
accessible chromatin
14
binding sites
11
histone modifications
11
variant allelic effects
3
eQTL
Date released
261
September, 2022
125
February, 2021
18
June, 2020
16
August, 2021
14
January, 2020
14
May, 2020
4
October, 2022
3
November, 2021
1
April, 2019
1
February, 2020
1
February, 2024
1
May, 2019
1
May, 2021
Available data
370
bed bed3+
89
bed bed9
36
bigWig
2
bigBed bed9
Organism
460
Homo sapiens
Biosample type
298
tissue
102
primary cell
53
cell line
7
in vitro differentiated cells
Organ
600
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
205
embryo
204
vasculature
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
124
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
457
AMP
3
ENCODE
Genome assembly (visualization)
460
hg19
117
GRCh38
BIOSAMPLE
TYPE
460 results
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candidate regulatory elements
chromatin state
target gene predictions
accessible chromatin
binding sites
histone modifications
variant allelic effects
eQTL
tissue
kidney
29
16
14
10
1
2
1
1
right kidney
20
10
10
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
left kidney
18
9
9
+ See 14 more…
primary cell
foreskin keratinocyte
11
4
4
foreskin fibroblast
6
1
2
1
4
2
kidney tubule cell
3
2
2
2
epithelial cell of proximal tubule
2
1
1
1
1
1
renal cortical epithelial cell
2
1
1
2
1
+ See 16 more…
cell line
HEK293
3
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
EH
2
1
1
+ See 8 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
foreskin melanocyte
1
1
1
renal cell carcinoma
1
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