Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
794
histone modifications
743
binding sites
660
target gene predictions
655
candidate regulatory elements
499
gene expression
425
accessible chromatin
388
chromatin state
162
differential activity
85
variant allelic effects
54
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
1760
February, 2021
1029
September, 2022
320
February, 2024
319
May, 2021
281
September, 2023
205
June, 2020
101
October, 2022
88
May, 2020
64
March, 2023
56
January, 2021
51
August, 2021
47
January, 2022
47
May, 2022
24
January, 2020
19
April, 2020
16
February, 2020
12
March, 2020
11
August, 2017
9
August, 2018
9
November, 2022
7
October, 2019
5
February, 2023
3
November, 2020
2
March, 2024
1
July, 2020
1
June, 2021
1
November, 2019
Available data
3387
bed bed3+
611
tsv
343
bed bed9
192
bigWig
108
txt
34
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
4443
Homo sapiens
Biosample type
2652
tissue
2352
cell line
2136
primary cell
470
in vitro differentiated cells
4
stem cell
Organ
735
epithelium
347
kidney
262
connective tissue
214
bodily fluid
204
blood
174
vasculature
160
skin of body
147
embryo
142
pancreas
121
lung
117
blood vessel
112
brain
86
liver
76
mammary gland
68
uterus
66
bone element
63
prostate gland
62
lymph node
56
musculature of body
56
penis
40
extraembryonic component
38
intestine
34
large intestine
33
artery
30
heart
29
eye
22
vein
16
lymphatic vessel
14
bronchus
12
bone marrow
11
placenta
10
pituitary gland
9
gonad
8
limb
8
mouth
8
testis
7
spinal cord
6
esophagus
6
lymphoid tissue
5
trachea
4
adipose tissue
2
stomach
1
adrenal gland
1
pericardium
1
thyroid gland
Project
4120
AMP
ENCODE
281
KPMP
59
T1D
19
LungMap
9
community
Genome assembly (visualization)
3780
hg19
739
GRCh38
1
hg18
award.project!
ENCODE
BIOSAMPLE
TYPE
4488 results
search-icon
table-tab-icon
Clear Filters
histone modifications
binding sites
target gene predictions
candidate regulatory elements
gene expression
accessible chromatin
chromatin state
differential activity
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
cell line
HeLa-S3
1
55
5
3
A549
1
2
19
21
1
18
H1-hESC
1
2
39
1
8
1
1
K562
1
2
23
7
1
7
MCF-7
2
3
6
9
1
5
+ See 765 more…
primary cell
monocyte
86
1
2
15
18
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
30
4
7
3
3
1
B cell
10
14
2
3
8
CD4-positive, alpha-beta memory T cell
9
14
9
+ See 392 more…
See all biosamples
Download