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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
794
histone modifications
743
binding sites
660
target gene predictions
655
candidate regulatory elements
gene expression
425
accessible chromatin
388
chromatin state
162
differential activity
85
variant allelic effects
56
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
1637
February, 2021
1029
September, 2022
273
February, 2024
243
May, 2021
205
June, 2020
110
September, 2023
101
October, 2022
88
May, 2020
56
January, 2021
51
March, 2023
47
January, 2022
47
May, 2022
24
January, 2020
19
April, 2020
18
August, 2021
11
August, 2017
9
November, 2022
7
October, 2019
5
February, 2023
5
March, 2020
2
May, 2024
2
November, 2020
1
June, 2021
1
November, 2019
Available data
3387
bed bed3+
343
bed bed9
183
bigWig
155
tsv
34
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
3946
Homo sapiens
Biosample type
2542
tissue
2331
cell line
1660
primary cell
396
in vitro differentiated cells
4
stem cell
Organ
492
epithelium
233
connective tissue
214
bodily fluid
204
blood
160
skin of body
155
kidney
143
vasculature
139
embryo
121
lung
112
brain
110
pancreas
97
blood vessel
76
mammary gland
68
uterus
67
liver
66
bone element
63
prostate gland
62
lymph node
56
penis
50
musculature of body
40
extraembryonic component
38
intestine
34
large intestine
29
eye
27
artery
25
heart
22
vein
14
bronchus
13
lymphatic vessel
12
bone marrow
11
placenta
10
pituitary gland
9
gonad
8
limb
8
mouth
8
testis
7
spinal cord
6
esophagus
6
lymphoid tissue
5
trachea
3
adipose tissue
2
stomach
1
adrenal gland
1
thyroid gland
Project
3792
AMP
ENCODE
110
KPMP
59
T1D
19
LungMap
11
community
Genome assembly (visualization)
3768
hg19
730
GRCh38
1
hg18
award.project!
ENCODE
annotation_type!
gene expression
BIOSAMPLE
TYPE
3991 results
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Clear Filters
histone modifications
binding sites
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
differential activity
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
cell line
HeLa-S3
1
55
5
3
A549
1
2
19
21
1
18
H1-hESC
1
2
39
1
1
1
K562
1
2
23
7
1
7
MCF-7
2
3
6
9
1
5
+ See 761 more…
primary cell
monocyte
86
1
2
18
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
30
4
7
3
1
B cell
10
14
3
8
CD4-positive, alpha-beta memory T cell
9
14
9
+ See 342 more…
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