Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
478
gene expression
324
candidate regulatory elements
262
accessible chromatin
258
target gene predictions
210
histone modifications
195
chromatin state
152
differential activity
100
binding sites
80
variant allelic effects
46
eQTL
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
481
September, 2022
454
February, 2021
281
September, 2023
255
May, 2021
151
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
53
June, 2020
42
August, 2021
40
May, 2022
37
January, 2022
24
October, 2022
23
January, 2020
19
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
3
November, 2020
2
May, 2024
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1243
bed bed3+
591
tsv
188
bigWig
162
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2072
Homo sapiens
Biosample type
2635
tissue
2299
cell line
2117
primary cell
470
in vitro differentiated cells
4
stem cell
Organ
690
epithelium
306
kidney
231
connective tissue
161
vasculature
109
blood vessel
108
pancreas
90
skin of body
58
liver
41
penis
40
mammary gland
37
extraembryonic component
37
musculature of body
35
brain
28
artery
25
lung
20
embryo
20
heart
20
vein
19
eye
14
bronchus
14
lymphatic vessel
13
bone element
12
bone marrow
prostate gland
9
blood
9
bodily fluid
8
placenta
6
esophagus
5
trachea
4
intestine
4
mouth
4
spinal cord
3
uterus
2
gonad
2
stomach
1
adipose tissue
1
adrenal gland
1
limb
1
pericardium
1
testis
1
thyroid gland
Project
1758
AMP
ENCODE
281
KPMP
57
T1D
19
LungMap
2
community
Genome assembly (visualization)
1455
hg19
366
GRCh38
award.project!
ENCODE
organ_slims!
prostate gland
annotation_type!
caQTL
BIOSAMPLE
TYPE
2117 results
search-icon
table-tab-icon
Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
15
18
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
27
14
13
CD8-positive, alpha-beta T cell
3
7
3
4
30
1
B cell
2
14
3
10
8
CD4-positive, alpha-beta memory T cell
14
9
9
+ See 391 more…
See all biosamples
Download