Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
target gene predictions
47
candidate regulatory elements
46
binding sites
27
chromatin state
25
histone modifications
12
accessible chromatin
2
eQTL
1
gene expression
1
pQTL
Date released
74
February, 2021
50
September, 2022
19
October, 2022
12
June, 2020
3
August, 2021
2
August, 2017
1
March, 2024
Available data
133
bed bed3+
25
bed bed9
1
tsv
Organism
161
Homo sapiens
Biosample type
148
cell line
9
primary cell
4
tissue
Organ
742
epithelium
574
kidney
390
brain
347
connective tissue
287
musculature of body
227
vasculature
224
lung
222
pancreas
205
intestine
200
heart
195
limb
174
blood vessel
161
bodily fluid
155
skin of body
152
blood
131
liver
129
embryo
127
large intestine
107
extraembryonic component
96
eye
84
stomach
76
adipose tissue
72
bone element
67
artery
65
mammary gland
63
prostate gland
59
small intestine
54
placenta
53
lymph node
53
penis
51
ureter
46
adrenal gland
38
gonad
34
spinal cord
34
thymus
33
esophagus
26
spleen
24
uterus
22
nerve
22
testis
19
vein
18
lymphoid tissue
16
thyroid gland
15
lymphatic vessel
15
mouth
15
ovary
15
skeleton
11
bronchus
10
breast
9
bone marrow
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
161
AMP
Genome assembly (visualization)
160
hg19
25
GRCh38
award.project!
ENCODE
month_released!
April, 2020
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
161 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
binding sites
chromatin state
histone modifications
accessible chromatin
eQTL
gene expression
pQTL
cell line
K562
7
2
7
1
1
GM12878
2
2
2
1
1
GM06990
2
2
1
1
1
HL-60
2
2
1
1
1
CMK
2
1
1
1
1
+ See 26 more…
primary cell
peripheral blood mononuclear cell
4
1
1
peripheral blood stem cell
1
1
1
tissue
blood
2
cerebrospinal fluid
1
whole blood
1
See all biosamples
Download