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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
284
gene expression
243
candidate regulatory elements
159
accessible chromatin
139
target gene predictions
121
chromatin state
94
differential activity
50
variant allelic effects
47
binding sites
33
histone modifications
5
eQTL
2
caQTL
Date released
349
September, 2022
300
February, 2021
160
September, 2023
76
February, 2024
38
March, 2023
35
August, 2021
34
May, 2021
33
June, 2020
27
May, 2020
20
January, 2020
20
January, 2021
15
November, 2022
12
February, 2023
10
February, 2020
9
March, 2020
7
April, 2020
7
October, 2022
6
August, 2018
5
October, 2019
4
March, 2024
3
August, 2017
2
May, 2022
1
April, 2019
1
January, 2022
1
July, 2020
1
May, 2019
1
November, 2019
Available data
670
bed bed3+
357
tsv
118
bed bed9
116
bigWig
90
txt
14
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1177
Homo sapiens
Biosample type
713
primary cell
355
tissue
82
cell line
27
in vitro differentiated cells
Organ
822
epithelium
649
kidney
466
brain
408
connective tissue
364
musculature of body
302
lung
270
intestine
260
vasculature
259
pancreas
245
heart
244
limb
218
bodily fluid
213
embryo
207
blood
201
blood vessel
194
skin of body
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
88
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
75
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
988
AMP
160
KPMP
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
791
hg19
192
GRCh38
award.project!
ENCODE
BIOSAMPLE
TYPE
1177 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
variant allelic effects
binding sites
histone modifications
eQTL
caQTL
primary cell
hepatocyte
13
1
7
2
1
2
1
4
endothelial cell
9
5
1
2
2
1
1
2
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
6
2
4
5
1
2
+ See 129 more…
tissue
kidney
7
29
10
14
16
1
1
2
1
right kidney
20
1
10
10
1
renal cortex interstitium
20
1
9
9
1
renal pelvis
19
2
9
9
1
left kidney
18
9
9
+ See 29 more…
cell line
EndoC_BH1
8
8
1
3
1
HEK293
3
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
+ See 17 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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