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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
258
gene expression
194
candidate regulatory elements
154
accessible chromatin
122
target gene predictions
103
chromatin state
92
differential activity
49
variant allelic effects
45
binding sites
30
histone modifications
9
Fine-mapped variants
8
eQTL
2
caQTL
Date released
289
September, 2022
254
February, 2021
155
September, 2023
76
February, 2024
38
March, 2023
37
May, 2021
31
June, 2020
25
May, 2020
23
August, 2021
21
January, 2020
20
January, 2021
15
February, 2020
15
March, 2020
15
November, 2022
12
February, 2023
7
April, 2020
6
August, 2018
6
October, 2022
5
October, 2019
3
August, 2017
3
March, 2024
3
November, 2019
2
January, 2022
2
May, 2019
2
May, 2022
1
July, 2020
Available data
595
bed bed3+
341
tsv
112
bigWig
100
bed bed9
78
txt
14
bigBed narrowPeak
6
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1066
Homo sapiens
Biosample type
693
primary cell
297
tissue
50
cell line
26
in vitro differentiated cells
Organ
822
epithelium
649
kidney
466
brain
408
connective tissue
364
musculature of body
302
lung
270
intestine
260
vasculature
259
pancreas
245
heart
244
limb
218
bodily fluid
213
embryo
207
blood
201
blood vessel
194
skin of body
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
88
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
75
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
882
AMP
155
KPMP
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
710
hg19
185
GRCh38
award.project!
ENCODE
BIOSAMPLE
TYPE
1066 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
eQTL
caQTL
primary cell
hepatocyte
13
1
7
2
1
2
1
4
endothelial cell
9
5
1
2
2
1
1
2
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
6
2
4
5
1
2
+ See 123 more…
tissue
muscle of arm
33
1
16
16
1
muscle of leg
27
2
14
15
tibial nerve
2
6
3
3
4
2
3
2
pigmented layer of retina
20
tibial artery
1
3
3
2
3
2
3
2
+ See 38 more…
cell line
EndoC_BH1
8
8
1
3
1
GM23248
2
1
1
1
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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