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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
113
candidate regulatory elements
65
target gene predictions
59
chromatin state
10
accessible chromatin
8
histone modifications
6
binding sites
3
eQTL
3
gene expression
variant allelic effects
Date released
164
September, 2022
71
February, 2021
10
June, 2020
6
May, 2021
4
August, 2017
3
February, 2024
3
January, 2022
3
March, 2024
2
March, 2020
1
October, 2022
Available data
206
bed bed3+
55
bed bed9
3
tsv
Organism
267
Homo sapiens
Biosample type
232
tissue
34
cell line
1
primary cell
Organ
781
epithelium
633
kidney
449
brain
392
connective tissue
357
musculature of body
301
lung
267
intestine
248
pancreas
245
vasculature
236
limb
235
heart
218
bodily fluid
213
embryo
207
blood
193
skin of body
192
blood vessel
168
large intestine
147
liver
143
extraembryonic component
108
stomach
103
eye
88
bone element
86
adipose tissue
81
uterus
80
mammary gland
80
small intestine
77
prostate gland
71
artery
71
placenta
64
penis
62
adrenal gland
62
lymph node
61
ureter
48
gonad
48
thymus
43
spinal cord
39
esophagus
34
spleen
26
testis
24
lymphoid tissue
23
nerve
22
vein
21
ovary
20
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
267
AMP
ENCODE
Genome assembly (visualization)
261
hg19
60
GRCh38
award.project!
ENCODE
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
267 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
binding sites
eQTL
gene expression
tissue
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
Peyer's patch
7
3
3
1
+ See 15 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
intestinal epithelial cell
1
See all biosamples
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