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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
117
candidate regulatory elements
67
target gene predictions
61
chromatin state
11
accessible chromatin
9
histone modifications
8
binding sites
4
variant allelic effects
3
eQTL
3
gene expression
Date released
170
September, 2022
76
February, 2021
11
June, 2020
7
February, 2024
6
May, 2021
4
August, 2017
3
January, 2022
3
March, 2024
2
March, 2020
1
October, 2022
Available data
221
bed bed3+
57
bed bed9
3
tsv
bigWig
Organism
283
Homo sapiens
Biosample type
232
tissue
34
cell line
17
primary cell
Organ
724
epithelium
616
kidney
445
brain
387
connective tissue
356
musculature of body
299
lung
270
intestine
234
vasculature
230
limb
229
heart
218
bodily fluid
213
embryo
213
pancreas
207
blood
194
skin of body
181
blood vessel
168
large intestine
143
extraembryonic component
132
liver
110
stomach
84
adipose tissue
81
mammary gland
81
uterus
80
small intestine
79
bone element
78
prostate gland
73
eye
71
placenta
66
artery
64
penis
63
adrenal gland
62
lymph node
61
ureter
48
gonad
48
thymus
43
spinal cord
41
esophagus
33
spleen
26
testis
24
lymphoid tissue
23
nerve
22
vein
21
ovary
21
thyroid gland
19
mouth
17
lymphatic vessel
13
breast
13
bronchus
13
pituitary gland
11
bone marrow
10
skeleton
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
283
AMP
ENCODE
Genome assembly (visualization)
277
hg19
62
GRCh38
award.project!
ENCODE
files.file_type!
bigWig
BIOSAMPLE
TYPE
283 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
binding sites
variant allelic effects
eQTL
gene expression
tissue
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
Peyer's patch
7
3
3
1
+ See 15 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
bronchial epithelial cell
4
2
2
1
1
2
enterocyte
3
bronchial goblet cell
1
intestinal epithelial cell
1
See all biosamples
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