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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
41
target gene predictions
36
chromatin state
7
accessible chromatin
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
98
September, 2022
41
February, 2021
7
June, 2020
5
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
Available data
125
bed bed3+
33
bed bed9
2
tsv
Organism
162
Homo sapiens
Biosample type
133
tissue
29
cell line
Organ
779
epithelium
642
kidney
450
brain
379
connective tissue
357
musculature of body
293
lung
264
intestine
254
pancreas
242
limb
240
heart
239
vasculature
200
embryo
185
blood vessel
176
skin of body
172
bodily fluid
162
blood
162
large intestine
140
extraembryonic component
138
liver
110
stomach
99
eye
87
adipose tissue
80
bone element
80
small intestine
77
uterus
70
prostate gland
69
artery
69
mammary gland
68
placenta
64
ureter
63
adrenal gland
57
penis
50
lymph node
47
thymus
45
gonad
41
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
testis
21
ovary
21
thyroid gland
20
vein
19
mouth
18
skeleton
16
lymphatic vessel
13
breast
13
pituitary gland
12
bronchus
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
162
AMP
ENCODE
Genome assembly (visualization)
158
hg19
37
GRCh38
award.project!
ENCODE
annotation_type!
binding sites
BIOSAMPLE
TYPE
162 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
eQTL
gene expression
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 6 more…
cell line
HT-29
2
2
1
1
1
HCT116
2
3
1
SW480
2
1
1
1
1
RKO
1
1
1
colon epithelial cell
1
1
1
+ See 3 more…
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