Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
41
target gene predictions
33
chromatin state
7
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
98
September, 2022
46
February, 2021
7
June, 2020
5
May, 2021
August, 2017
3
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
128
bed bed3+
33
bed bed9
2
tsv
Organism
165
Homo sapiens
Biosample type
131
tissue
34
cell line
Organ
819
epithelium
649
kidney
460
brain
403
connective tissue
361
musculature of body
301
lung
266
intestine
259
vasculature
256
pancreas
245
heart
244
limb
216
bodily fluid
212
embryo
205
blood
200
blood vessel
193
skin of body
165
large intestine
148
liver
143
extraembryonic component
109
stomach
105
eye
88
bone element
87
adipose tissue
81
uterus
80
mammary gland
79
small intestine
78
prostate gland
75
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
22
vein
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
165
AMP
ENCODE
Genome assembly (visualization)
161
hg19
37
GRCh38
award.project!
ENCODE
organ_slims!
breast
month_released!
August, 2017
BIOSAMPLE
TYPE
165 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
2
1
mucosa of rectum
4
2
2
+ See 7 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
See all biosamples
Download