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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
173
candidate regulatory elements
137
target gene predictions
113
accessible chromatin
101
chromatin state
95
gene expression
42
binding sites
41
differential activity
38
eQTL
36
histone modifications
27
variant allelic effects
11
Fine-mapped variants
2
caQTL
2
pQTL
2
sQTL
2
variant to gene
Date released
262
September, 2022
186
February, 2021
52
May, 2021
47
March, 2023
44
February, 2024
31
June, 2020
20
January, 2021
19
August, 2021
19
March, 2020
17
September, 2023
16
May, 2020
14
January, 2020
13
August, 2017
13
October, 2022
12
January, 2022
11
February, 2020
8
October, 2019
7
August, 2018
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
February, 2023
2
January, 2018
2
March, 2024
2
May, 2024
2
November, 2019
2
September, 2018
1
April, 2019
1
June, 2021
Available data
547
bed bed3+
134
tsv
87
bed bed9
65
bigWig
14
bigBed narrowPeak
7
txt
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
822
Homo sapiens
Biosample type
341
tissue
328
primary cell
99
cell line
53
in vitro differentiated cells
1
stem cell
Organ
822
epithelium
649
kidney
466
brain
410
connective tissue
364
musculature of body
302
lung
270
intestine
260
vasculature
259
pancreas
245
heart
244
limb
218
bodily fluid
213
embryo
207
blood
201
blood vessel
194
skin of body
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
88
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
75
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
776
AMP
ENCODE
20
T1D
15
KPMP
4
ITG
4
community
3
LungMap
Genome assembly (visualization)
664
hg19
150
GRCh38
2
hg18
award.project!
ENCODE
BIOSAMPLE
TYPE
822 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
differential activity
eQTL
histone modifications
variant allelic effects
Fine-mapped variants
caQTL
pQTL
sQTL
variant to gene
tissue
large intestine
27
14
1
13
1
islet of Langerhans
1
6
3
11
2
13
1
1
2
2
2
adipose tissue
7
8
2
6
3
1
4
1
body of pancreas
8
5
4
2
1
1
3
sigmoid colon
10
7
1
5
+ See 28 more…
primary cell
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
pancreatic beta cell
3
6
3
3
1
pancreatic ductal cell
2
4
3
1
3
2
1
+ See 54 more…
cell line
EndoC_BH1
1
8
8
3
1
HT-29
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
+ See 21 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
pancreatic ductal cell
3
fibroblast
1
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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