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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
155
candidate regulatory elements
105
target gene predictions
89
chromatin state
65
accessible chromatin
52
gene expression
40
binding sites
31
histone modifications
23
eQTL
17
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
224
September, 2022
162
February, 2021
28
June, 2020
22
May, 2021
21
February, 2024
17
September, 2023
14
October, 2022
12
January, 2020
12
May, 2020
11
August, 2017
11
August, 2021
11
March, 2020
9
February, 2020
8
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
March, 2024
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
428
bed bed3+
78
bed bed9
68
tsv
24
bigWig
7
txt
4
bigBed bed9
1
bigBed narrowPeak
Organism
601
Homo sapiens
Biosample type
253
primary cell
230
tissue
67
cell line
50
in vitro differentiated cells
1
stem cell
Organ
822
epithelium
649
kidney
466
brain
410
connective tissue
364
musculature of body
302
lung
270
intestine
260
vasculature
259
pancreas
245
heart
244
limb
218
bodily fluid
213
embryo
207
blood
201
blood vessel
194
skin of body
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
88
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
75
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
575
AMP
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
522
hg19
114
GRCh38
2
hg18
award.project!
ENCODE
BIOSAMPLE
TYPE
601 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
endothelial cell of umbilical vein
6
4
5
2
2
1
osteoblast
2
2
1
5
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
fibroblast of dermis
4
4
3
1
+ See 43 more…
tissue
large intestine
27
14
13
1
1
adipose tissue
7
8
6
2
3
1
4
1
sigmoid colon
10
7
5
1
subcutaneous adipose tissue
2
1
2
5
6
1
1
3
transverse colon
8
5
4
1
1
+ See 19 more…
cell line
HT-29
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
fibroblast of cardiac tissue
2
1
2
+ See 16 more…
in vitro differentiated cells
adipocyte
4
6
6
4
1
1
1
mesenchymal stem cell
3
3
2
1
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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