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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
45
accessible chromatin
41
gene expression
33
differential activity
29
target gene predictions
15
candidate regulatory elements
11
variant allelic effects
9
chromatin state
8
binding sites
8
histone modifications
2
caQTL
2
eQTL
Date released
41
March, 2023
30
May, 2021
29
February, 2024
28
September, 2022
25
February, 2021
20
January, 2021
7
August, 2018
6
October, 2019
3
June, 2020
3
May, 2022
3
October, 2022
2
May, 2020
1
February, 2020
1
February, 2023
1
January, 2020
1
June, 2021
1
March, 2020
1
November, 2019
Available data
118
bed bed3+
59
tsv
34
bigWig
14
bigBed narrowPeak
9
bed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
1
bigBed bed9
Organism
203
Homo sapiens
Biosample type
tissue
147
primary cell
51
cell line
5
in vitro differentiated cells
Organ
761
epithelium
348
kidney
315
connective tissue
214
bodily fluid
204
blood
178
embryo
176
vasculature
169
skin of body
145
pancreas
121
lung
117
blood vessel
117
brain
93
liver
79
mammary gland
68
uterus
66
bone element
63
prostate gland
62
lymph node
62
penis
58
musculature of body
45
extraembryonic component
38
intestine
35
eye
34
large intestine
33
artery
31
heart
22
vein
18
lymphatic vessel
14
bronchus
12
bone marrow
11
placenta
10
pituitary gland
9
gonad
8
limb
8
mouth
8
testis
7
spinal cord
6
esophagus
6
lymphoid tissue
5
adipose tissue
5
trachea
4
nose
2
stomach
1
adrenal gland
1
pericardium
1
thyroid gland
Project
181
AMP
ENCODE
20
T1D
2
community
Genome assembly (visualization)
134
hg19
16
GRCh38
award.project!
ENCODE
biosample_type!
tissue
BIOSAMPLE
TYPE
203 results
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Clear Filters
accessible chromatin
gene expression
differential activity
target gene predictions
candidate regulatory elements
variant allelic effects
chromatin state
binding sites
histone modifications
caQTL
eQTL
primary cell
pancreatic beta cell
6
3
3
3
1
pancreatic ductal cell
4
3
3
2
1
1
2
pancreatic alpha cell
5
3
3
3
1
pancreatic delta cell
4
3
3
3
1
pancreatic acinar cell
3
3
3
2
1
+ See 20 more…
cell line
EndoC_BH1
8
8
3
1
1
LHCN-M2
1
1
2
1
1
1
A673
2
2
1
Panc1
2
2
1
SJCRH30
1
1
2
1
+ See 4 more…
in vitro differentiated cells
pancreatic ductal cell
3
myotube
1
1
See all biosamples
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