Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
9
accessible chromatin
6
gene expression
4
binding sites
4
candidate regulatory elements
3
chromatin state
3
histone modifications
3
variant allelic effects
2
eQTL
2
target gene predictions
Date released
14
February, 2024
9
February, 2021
6
September, 2022
3
May, 2022
October, 2022
1
February, 2020
1
January, 2020
1
May, 2020
1
October, 2019
Available data
27
bed bed3+
4
bigWig
3
bed bed9
1
bigBed bed9
Organism
36
Homo sapiens
Biosample type
306
tissue
36
primary cell
17
cell line
2
in vitro differentiated cells
Organ
686
epithelium
305
kidney
221
connective tissue
159
vasculature
109
blood vessel
108
pancreas
87
skin of body
58
liver
39
penis
38
mammary gland
36
extraembryonic component
36
musculature of body
33
brain
28
artery
23
lung
21
heart
20
embryo
19
vein
18
eye
14
bronchus
14
lymphatic vessel
13
bone element
12
bone marrow
10
prostate gland
9
blood
9
bodily fluid
7
placenta
6
esophagus
5
trachea
4
intestine
4
mouth
4
spinal cord
3
uterus
2
gonad
2
stomach
1
adipose tissue
1
adrenal gland
1
limb
1
pericardium
1
testis
1
thyroid gland
Project
36
AMP
ENCODE
Genome assembly (visualization)
35
hg19
4
GRCh38
award.project!
ENCODE
month_released!
October, 2022
BIOSAMPLE
TYPE
36 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
binding sites
candidate regulatory elements
chromatin state
histone modifications
variant allelic effects
eQTL
target gene predictions
primary cell
skeletal muscle satellite cell
2
2
2
2
1
skeletal muscle cell
1
2
1
1
1
skeletal muscle fiber
2
2
2
type I muscle cell
2
1
1
type II muscle cell
2
1
1
+ See 4 more…
See all biosamples
Download