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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
171
candidate regulatory elements
93
target gene predictions
89
chromatin state
33
accessible chromatin
15
binding sites
15
gene expression
13
histone modifications
7
eQTL
7
variant allelic effects
6
Fine-mapped variants
2
caQTL
1
differential activity
Date released
246
September, 2022
128
February, 2021
15
February, 2024
11
June, 2020
9
March, 2020
6
February, 2020
6
May, 2020
6
May, 2021
5
January, 2020
4
May, 2022
4
October, 2022
3
August, 2017
2
January, 2021
2
March, 2024
2
May, 2019
1
August, 2021
1
January, 2022
1
October, 2019
Available data
339
bed bed3+
85
bed bed9
18
tsv
17
bigWig
3
bigBed bed9
1
bed bed9+
Organism
452
Homo sapiens
Biosample type
328
tissue
70
cell line
52
primary cell
2
in vitro differentiated cells
Organ
822
epithelium
649
kidney
466
brain
408
connective tissue
364
musculature of body
302
lung
270
intestine
260
vasculature
259
pancreas
245
heart
244
limb
218
bodily fluid
213
embryo
207
blood
201
blood vessel
194
skin of body
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
88
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
75
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
450
AMP
ENCODE
2
T1D
Genome assembly (visualization)
440
hg19
107
GRCh38
award.project!
ENCODE
BIOSAMPLE
TYPE
452 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
gene expression
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
caQTL
differential activity
tissue
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
psoas muscle
7
8
4
1
gastrocnemius medialis
8
5
4
1
+ See 30 more…
cell line
LHCN-M2
2
1
1
1
1
1
MG63
2
1
1
1
1
1
OCI-LY1
2
1
1
1
1
SJSA1
2
1
1
1
1
A673
2
2
1
+ See 9 more…
primary cell
skeletal muscle satellite cell
2
1
2
2
2
skeletal muscle cell
2
1
1
1
1
skeletal muscle fiber
2
2
2
type I muscle cell
2
1
1
1
type II muscle cell
2
1
1
1
+ See 10 more…
in vitro differentiated cells
myotube
1
1
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