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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
250
candidate regulatory elements
173
target gene predictions
139
chromatin state
125
accessible chromatin
104
gene expression
43
binding sites
43
eQTL
42
differential activity
38
histone modifications
34
variant allelic effects
17
Fine-mapped variants
4
caQTL
2
pQTL
2
sQTL
2
variant to gene
Date released
368
September, 2022
232
February, 2021
56
February, 2024
53
May, 2021
47
March, 2023
30
June, 2020
27
March, 2020
21
May, 2020
20
August, 2021
20
January, 2021
19
January, 2020
17
February, 2020
17
September, 2023
15
October, 2022
13
August, 2017
11
January, 2022
9
October, 2019
7
August, 2018
7
November, 2022
6
May, 2022
3
April, 2020
3
November, 2020
2
February, 2023
2
January, 2018
2
March, 2024
2
May, 2019
2
May, 2024
2
November, 2019
2
September, 2018
1
April, 2019
1
June, 2021
Available data
686
bed bed3+
146
tsv
125
bed bed9
73
bigWig
14
bigBed narrowPeak
7
bigBed bed9
7
txt
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
1018
Homo sapiens
Biosample type
513
tissue
367
primary cell
82
cell line
55
in vitro differentiated cells
1
stem cell
Organ
822
epithelium
649
kidney
466
brain
410
connective tissue
364
musculature of body
302
lung
270
intestine
260
vasculature
259
pancreas
245
heart
244
limb
218
bodily fluid
213
embryo
207
blood
201
blood vessel
194
skin of body
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
88
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
75
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
972
AMP
ENCODE
20
T1D
15
KPMP
4
ITG
4
community
3
LungMap
Genome assembly (visualization)
856
hg19
198
GRCh38
2
hg18
award.project!
ENCODE
BIOSAMPLE
TYPE
1018 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
eQTL
differential activity
histone modifications
variant allelic effects
Fine-mapped variants
caQTL
pQTL
sQTL
variant to gene
tissue
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
islet of Langerhans
1
3
6
11
2
13
1
1
2
2
2
adipose tissue
7
8
6
2
3
1
4
1
+ See 39 more…
primary cell
osteoblast
2
2
1
5
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
pancreatic beta cell
3
6
3
3
1
pancreatic ductal cell
2
4
3
1
3
2
1
+ See 63 more…
cell line
EndoC_BH1
1
8
8
3
1
GM23248
2
1
1
1
1
1
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
Panc1
2
2
1
+ See 16 more…
in vitro differentiated cells
adipocyte
4
6
6
4
1
1
1
mesenchymal stem cell
3
3
2
1
1
1
chondrocyte
5
pancreatic ductal cell
3
fibroblast
1
1
+ See 10 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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