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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
24
gene expression
21
accessible chromatin
19
candidate regulatory elements
16
target gene predictions
8
binding sites
8
eQTL
7
histone modifications
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
2
chromatin state
1
caQTL
Date released
29
February, 2024
22
September, 2022
18
February, 2021
9
August, 2021
9
March, 2020
5
November, 2021
4
March, 2023
3
January, 2020
3
June, 2020
3
May, 2020
2
August, 2017
2
February, 2020
2
May, 2021
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
76
bed bed3+
28
tsv
22
bigWig
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
117
Homo sapiens
Biosample type
61
primary cell
50
tissue
cell line
6
in vitro differentiated cells
Organ
850
epithelium
541
kidney
388
connective tissue
334
brain
290
musculature of body
233
pancreas
220
vasculature
204
intestine
200
heart
188
limb
169
blood vessel
165
lung
117
liver
114
skin of body
111
extraembryonic component
111
large intestine
96
stomach
91
eye
78
adipose tissue
71
embryo
65
small intestine
63
artery
59
adrenal gland
55
placenta
51
ureter
44
mammary gland
43
penis
38
esophagus
38
thymus
36
gonad
32
bone element
32
spinal cord
28
spleen
21
nerve
21
prostate gland
19
ovary
19
thyroid gland
17
uterus
17
vein
16
lymphatic vessel
16
testis
15
skeleton
14
lymphoid tissue
13
bodily fluid
13
bronchus
12
blood
12
bone marrow
12
mouth
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
112
AMP
5
ENCODE
Genome assembly (visualization)
86
hg19
41
GRCh38
1
hg18
award.project!
LungMap
biosample_type!
cell line
files.file_type!
bed bed9
BIOSAMPLE
TYPE
117 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
binding sites
eQTL
histone modifications
differential activity
variant allelic effects
Fine-mapped variants
chromatin state
caQTL
primary cell
hepatocyte
13
8
1
3
1
4
2
endothelial cell of hepatic sinusoid
4
6
6
hepatic stellate cell
1
3
1
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
tissue
liver
1
4
13
10
1
7
2
1
2
1
right lobe of liver
1
2
1
1
3
in vitro differentiated cells
hepatocyte
2
1
hepatocyte(AFP)
3
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