Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
51
candidate regulatory elements
30
target gene predictions
8
accessible chromatin
2
gene expression
2
variant allelic effects
1
chromatin state
1
eQTL
1
histone modifications
Date released
46
September, 2022
29
February, 2021
9
November, 2021
3
June, 2020
2
February, 2024
2
March, 2024
2
May, 2021
1
August, 2017
1
January, 2022
1
March, 2020
Available data
93
bed bed3+
bed bed9
5
bigWig
2
tsv
Organism
96
Homo sapiens
Biosample type
85
tissue
11
primary cell
Organ
850
epithelium
541
kidney
388
connective tissue
334
brain
290
musculature of body
233
pancreas
220
vasculature
204
intestine
200
heart
188
limb
169
blood vessel
165
lung
117
liver
114
skin of body
111
extraembryonic component
111
large intestine
96
stomach
91
eye
78
adipose tissue
71
embryo
65
small intestine
63
artery
59
adrenal gland
55
placenta
51
ureter
44
mammary gland
43
penis
38
esophagus
38
thymus
36
gonad
32
bone element
32
spinal cord
28
spleen
21
nerve
21
prostate gland
19
ovary
19
thyroid gland
17
uterus
17
vein
16
lymphatic vessel
16
testis
15
skeleton
14
lymphoid tissue
13
bodily fluid
13
bronchus
12
blood
12
bone marrow
12
mouth
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
87
AMP
9
ENCODE
Genome assembly (visualization)
93
hg19
10
GRCh38
award.project!
LungMap
biosample_type!
cell line
files.file_type!
bed bed9
BIOSAMPLE
TYPE
96 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
gene expression
variant allelic effects
chromatin state
eQTL
histone modifications
tissue
stomach
40
21
3
1
1
1
stomach smooth muscle
4
2
1
gastroesophageal sphincter
5
1
mucosa of stomach
2
1
esophagus - gastroesophageal junction
1
+ See 1 more…
primary cell
parietal cell
1
1
1
peptic cell
1
1
1
foveolar cell of stomach
1
1
stomach neuroendocrine cell
1
1
gastric goblet cell
1
See all biosamples
Download