Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
58
target gene predictions
47
binding sites
47
candidate regulatory elements
27
chromatin state
25
histone modifications
15
accessible chromatin
2
eQTL
gene expression
1
variant allelic effects
Date released
75
February, 2021
75
September, 2022
29
February, 2024
19
October, 2022
13
June, 2020
4
May, 2021
2
August, 2017
2
August, 2021
2
November, 2021
1
April, 2020
Available data
195
bed bed3+
25
bed bed9
2
bigWig
Organism
222
Homo sapiens
Biosample type
195
cell line
25
primary cell
2
tissue
Organ
676
epithelium
450
kidney
447
brain
409
connective tissue
364
musculature of body
310
lung
286
intestine
239
limb
234
heart
230
vasculature
217
bodily fluid
209
pancreas
206
blood
205
embryo
202
skin of body
179
blood vessel
172
large intestine
146
extraembryonic component
132
liver
117
stomach
108
eye
87
mammary gland
84
small intestine
83
bone element
81
uterus
77
prostate gland
76
adipose tissue
73
placenta
72
adrenal gland
67
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
18
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
12
breast
12
pituitary gland
11
bone marrow
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
219
AMP
2
ENCODE
1
LungMap
Genome assembly (visualization)
222
hg19
55
GRCh38
award.project!
T1D
annotation_type!
gene expression
BIOSAMPLE
TYPE
222 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
binding sites
candidate regulatory elements
chromatin state
histone modifications
accessible chromatin
eQTL
variant allelic effects
cell line
K562
23
2
7
7
1
1
GM12878
8
2
2
2
1
1
GM06990
1
2
2
1
1
1
GM19240
2
2
1
1
1
1
HAP-1
2
1
2
1
1
1
+ See 23 more…
primary cell
bronchial epithelial cell
2
2
4
2
1
1
peripheral blood mononuclear cell
1
4
1
club cell
1
2
peripheral blood stem cell
1
1
1
bronchial goblet cell
1
tissue
blood
2
See all biosamples
Download