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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
84
candidate regulatory elements
46
target gene predictions
42
chromatin state
12
accessible chromatin
7
binding sites
5
histone modifications
3
eQTL
3
gene expression
Date released
116
September, 2022
56
February, 2021
8
June, 2020
May, 2021
6
November, 2021
3
August, 2017
3
February, 2024
3
January, 2022
3
March, 2024
2
March, 2020
1
November, 2019
1
October, 2022
Available data
157
bed bed3+
39
bed bed9
4
bigWig
3
tsv
Organism
202
Homo sapiens
Biosample type
164
tissue
32
cell line
6
primary cell
Organ
895
epithelium
652
kidney
455
brain
442
connective tissue
369
musculature of body
307
lung
283
intestine
263
vasculature
251
heart
241
limb
224
pancreas
214
bodily fluid
208
embryo
203
blood
201
blood vessel
199
skin of body
169
large intestine
153
liver
143
extraembryonic component
117
stomach
109
eye
87
bone element
86
adipose tissue
85
mammary gland
83
small intestine
81
uterus
76
prostate gland
73
artery
72
placenta
71
adrenal gland
64
ureter
63
penis
61
lymph node
49
gonad
48
thymus
45
esophagus
42
spinal cord
33
spleen
26
testis
25
nerve
24
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
12
breast
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
196
AMP
6
ENCODE
Genome assembly (visualization)
196
hg19
51
GRCh38
award.project!
T1D
month_released!
May, 2021
BIOSAMPLE
TYPE
202 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
27
13
13
1
1
spleen
15
7
6
2
1
1
1
sigmoid colon
10
6
5
1
transverse colon
8
4
4
1
1
colonic mucosa
4
2
3
1
+ See 8 more…
cell line
HT-29
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
RKO
1
1
1
1
HCT-116 cell
1
2
+ See 3 more…
primary cell
colon epithelial cell
3
3
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