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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
55
accessible chromatin
48
gene expression
34
target gene predictions
31
differential activity
24
candidate regulatory elements
17
chromatin state
15
eQTL
11
variant allelic effects
histone modifications
5
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
45
March, 2023
44
September, 2022
33
May, 2021
25
February, 2021
25
February, 2024
18
November, 2021
9
March, 2020
8
August, 2021
7
August, 2018
6
May, 2020
6
October, 2019
4
January, 2020
4
January, 2022
4
June, 2020
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
133
bed bed3+
76
tsv
47
bigWig
14
bigBed narrowPeak
13
bed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
249
Homo sapiens
Biosample type
112
tissue
103
primary cell
31
cell line
3
in vitro differentiated cells
Organ
899
epithelium
646
kidney
431
connective tissue
418
brain
368
musculature of body
307
lung
281
intestine
258
vasculature
249
heart
249
pancreas
242
limb
204
embryo
198
blood vessel
193
bodily fluid
191
skin of body
183
blood
169
large intestine
142
liver
141
extraembryonic component
118
stomach
105
eye
88
adipose tissue
84
small intestine
82
mammary gland
81
bone element
81
uterus
73
adrenal gland
71
prostate gland
70
artery
70
placenta
64
ureter
59
penis
58
lymph node
49
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
25
nerve
25
testis
23
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
20
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
breast
12
pituitary gland
10
tongue
10
urinary bladder
10
vagina
9
bone marrow
4
nose
3
trachea
1
pericardium
Project
231
AMP
T1D
18
ENCODE
community
Genome assembly (visualization)
160
hg19
61
GRCh38
award.project!
community
T1D
annotation_type!
histone modifications
BIOSAMPLE
TYPE
249 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
Fine-mapped variants
binding sites
sQTL
variant to gene
tissue
islet of Langerhans
6
11
1
3
13
1
2
2
2
2
body of pancreas
2
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
endocrine pancreas
4
7
4
pancreatic ductal cell
2
+ See 6 more…
primary cell
pancreatic ductal cell
5
3
2
3
1
1
pancreatic acinar cell
5
3
2
3
1
pancreatic beta cell
6
3
1
3
1
pancreatic alpha cell
5
3
1
3
1
pancreatic delta cell
3
3
2
3
1
+ See 12 more…
cell line
EndoC_BH1
8
8
1
1
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic ductal cell
1
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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