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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
target gene predictions
977
histone modifications
chromatin state
817
binding sites
643
accessible chromatin
512
gene expression
166
eQTL
139
variant allelic effects
74
Fine-mapped variants
48
differential activity
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
2588
February, 2021
844
September, 2022
289
June, 2020
245
May, 2021
198
February, 2024
134
May, 2020
123
August, 2021
105
January, 2022
99
October, 2022
84
March, 2020
82
January, 2020
64
February, 2020
61
March, 2023
44
November, 2022
31
February, 2023
30
March, 2024
15
May, 2022
13
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
4252
bed bed3+
617
tsv
272
bigWig
108
txt
24
csv
13
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
5033
Homo sapiens
Biosample type
1753
cell line
1618
tissue
1347
primary cell
361
in vitro differentiated cells
Organ
522
epithelium
357
kidney
318
brain
277
connective tissue
213
musculature of body
193
pancreas
159
vasculature
153
lung
149
heart
146
intestine
145
limb
134
bodily fluid
127
blood
126
blood vessel
120
skin of body
114
liver
101
embryo
91
large intestine
87
eye
74
extraembryonic component
66
adipose tissue
60
stomach
56
bone element
54
artery
50
mammary gland
50
prostate gland
45
lymph node
43
penis
39
small intestine
38
placenta
38
ureter
32
adrenal gland
30
gonad
26
esophagus
26
spinal cord
23
thymus
20
spleen
20
uterus
18
nerve
18
testis
14
vein
13
lymphoid tissue
12
skeleton
12
thyroid gland
11
mouth
11
ovary
9
bronchus
8
breast
8
lymphatic vessel
6
bone marrow
6
tongue
6
vagina
5
trachea
5
urinary bladder
3
pituitary gland
2
nose
1
pericardium
Project
5080
AMP
281
KPMP
222
ENCODE
32
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
4387
hg19
492
GRCh38
4
hg18
annotation_type!
target gene predictions
chromatin state
BIOSAMPLE
TYPE
5080 results
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Clear Filters
candidate regulatory elements
histone modifications
binding sites
accessible chromatin
gene expression
eQTL
variant allelic effects
Fine-mapped variants
differential activity
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
cell line
A549
21
1
2
1
EndoC_BH1
1
1
8
8
1
1
breast cancer cell
11
9
MCF-7
9
2
3
1
H1-hESC
1
1
2
1
8
+ See 754 more…
tissue
kidney
29
2
1
10
7
1
1
heart
37
1
1
5
3
2
stomach
40
1
3
1
1
islet of Langerhans
1
2
6
11
13
1
2
2
2
brain
29
3
1
2
1
2
1
+ See 254 more…
primary cell
monocyte
86
1
17
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
30
2
3
hepatocyte
1
4
1
7
13
2
common myeloid progenitor, CD34-positive
27
endothelial cell
1
2
4
9
1
2
2
+ See 308 more…
in vitro differentiated cells
neural progenitor cell
5
15
10
7
hematopoietic multipotent progenitor cell
19
1
1
1
1
adipocyte
4
1
1
4
1
cardiomyocytes
11
extended pluripotent stem (EPS) cells
9
+ See 113 more…
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