Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
832
chromatin state
174
target gene predictions
152
accessible chromatin
126
eQTL
92
histone modifications
72
Fine-mapped variants
9
gene expression
6
binding sites
5
caQTL
Date released
802
September, 2022
215
February, 2024
102
January, 2022
97
May, 2021
72
March, 2020
67
January, 2020
25
February, 2020
12
October, 2019
11
February, 2021
11
May, 2020
11
November, 2019
10
August, 2021
9
May, 2019
7
April, 2019
6
February, 2023
6
May, 2022
3
September, 2018
2
November, 2020
Available data
827
bed bed9
434
bed bed3+
153
bigWig
106
tsv
31
bigBed bed9
Organism
1467
Homo sapiens
Biosample type
732
tissue
371
primary cell
365
cell line
in vitro differentiated cells
Organ
151
brain
106
epithelium
102
kidney
85
musculature of body
83
heart
81
vasculature
78
limb
72
embryo
71
blood vessel
71
lung
68
connective tissue
60
intestine
56
uterus
54
liver
53
bodily fluid
51
blood
43
pancreas
37
large intestine
37
skin of body
33
extraembryonic component
28
artery
24
stomach
23
adipose tissue
22
bone element
20
small intestine
17
placenta
16
ureter
15
adrenal gland
14
mammary gland
14
prostate gland
13
spinal cord
12
eye
11
gonad
11
nerve
11
skeleton
11
thymus
10
esophagus
10
penis
8
lymph node
8
spleen
6
lymphoid tissue
6
testis
5
mouth
5
ovary
5
thyroid gland
5
vein
3
breast
3
vagina
2
bronchus
2
lymphatic vessel
tongue
2
urinary bladder
1
bone marrow
1
pituitary gland
Project
1468
AMP
333
ENCODE
3
T1D
Genome assembly (visualization)
6153
hg19
1468
GRCh38
4
hg18
organ_slims!
tongue
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
1468 results
search-icon
table-tab-icon
Clear Filters
chromatin state
target gene predictions
accessible chromatin
eQTL
histone modifications
Fine-mapped variants
gene expression
binding sites
caQTL
tissue
kidney
16
9
heart
21
3
brain
18
1
2
stomach
19
1
lung
16
1
+ See 146 more…
primary cell
monocyte
13
3
84
hepatocyte
1
6
3
5
endothelial cell of hepatic sinusoid
4
4
6
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
+ See 100 more…
cell line
HeLa-S3
3
51
H1-hESC
1
37
K562
6
16
HFFc6
19
A549
18
+ See 154 more…
See all biosamples
Download