Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
887
histone modifications
780
binding sites
734
candidate regulatory elements
700
target gene predictions
438
accessible chromatin
433
chromatin state
86
variant allelic effects
12
gene expression
9
eQTL
5
caQTL
5
hQTL
3
meQTL
2
other
2
sQTL
Date released
1799
February, 2021
1134
September, 2022
285
February, 2024
269
May, 2021
225
June, 2020
99
October, 2022
90
May, 2020
47
May, 2022
40
August, 2021
27
January, 2020
24
November, 2022
16
August, 2017
15
March, 2020
9
October, 2019
5
January, 2022
5
September, 2023
4
November, 2019
2
November, 2020
1
June, 2021
Available data
3656
bed bed3+
383
bed bed9
148
bigWig
34
bed bed9+
16
bigBed narrowPeak
9
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
4051
Homo sapiens
Biosample type
tissue
2310
cell line
1394
primary cell
387
in vitro differentiated cells
4
stem cell
Organ
387
epithelium
260
connective tissue
214
bodily fluid
204
blood
169
skin of body
168
embryo
121
vasculature
118
lung
116
brain
97
kidney
80
blood vessel
79
mammary gland
68
uterus
66
liver
64
bone element
63
prostate gland
62
lymph node
62
penis
57
musculature of body
57
pancreas
45
extraembryonic component
38
intestine
35
eye
34
large intestine
24
artery
24
heart
21
vein
13
bronchus
12
lymphatic vessel
11
placenta
10
bone marrow
10
pituitary gland
8
gonad
8
limb
8
mouth
7
spinal cord
7
testis
6
esophagus
6
lymphoid tissue
5
trachea
4
adipose tissue
4
nose
2
stomach
1
adrenal gland
1
thyroid gland
Project
4096
AMP
333
ENCODE
58
T1D
19
LungMap
Genome assembly (visualization)
4096
hg19
801
GRCh38
1
hg18
biosample_type!
tissue
BIOSAMPLE
TYPE
4096 results
search-icon
table-tab-icon
Clear Filters
histone modifications
binding sites
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
variant allelic effects
gene expression
eQTL
caQTL
hQTL
meQTL
other
sQTL
cell line
HeLa-S3
1
5
55
3
A549
1
2
21
19
1
18
H1-hESC
1
2
1
39
1
1
K562
1
2
7
23
1
7
MCF-7
2
3
9
6
1
5
+ See 760 more…
primary cell
monocyte
86
1
1
17
1
2
1
common myeloid progenitor, CD34-positive
27
14
13
CD8-positive, alpha-beta T cell
30
7
3
2
1
B cell
14
10
2
8
CD4-positive, alpha-beta memory T cell
14
9
9
+ See 258 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
1
1
19
10
1
10
neural progenitor cell
14
5
5
10
4
adipocyte
1
1
4
6
4
6
embryonic stem cell
1
1
1
5
5
mesenchymal stem cell
1
1
3
3
1
2
+ See 103 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download