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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
146
candidate regulatory elements
77
target gene predictions
74
chromatin state
19
accessible chromatin
7
binding sites
7
histone modifications
7
variant allelic effects
6
Fine-mapped variants
6
eQTL
5
gene expression
2
caQTL
Date released
204
September, 2022
92
February, 2021
14
February, 2024
9
March, 2020
6
June, 2020
6
May, 2021
5
January, 2020
5
May, 2020
3
August, 2017
3
May, 2022
3
October, 2022
2
February, 2020
2
May, 2019
1
August, 2021
1
October, 2019
Available data
270
bed bed3+
71
bed bed9
8
bigWig
8
tsv
3
bigBed bed9
Organism
356
Homo sapiens
Biosample type
299
tissue
38
primary cell
17
cell line
2
in vitro differentiated cells
Organ
446
epithelium
423
brain
384
kidney
356
musculature of body
328
connective tissue
297
lung
264
intestine
237
limb
219
heart
217
bodily fluid
206
blood
203
embryo
195
vasculature
189
skin of body
164
large intestine
154
blood vessel
148
pancreas
142
extraembryonic component
119
liver
107
stomach
103
eye
82
bone element
81
mammary gland
79
small intestine
78
uterus
76
prostate gland
70
placenta
69
adipose tissue
64
penis
64
ureter
62
lymph node
61
adrenal gland
60
artery
48
thymus
43
gonad
41
spinal cord
36
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
vein
19
ovary
19
thyroid gland
18
skeleton
17
mouth
13
bronchus
12
lymphatic vessel
11
breast
11
pituitary gland
10
bone marrow
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
356
AMP
11
ENCODE
Genome assembly (visualization)
356
hg19
85
GRCh38
BIOSAMPLE
TYPE
356 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
eQTL
gene expression
caQTL
tissue
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
psoas muscle
7
8
4
1
gastrocnemius medialis
8
5
4
1
+ See 16 more…
primary cell
skeletal muscle satellite cell
2
1
2
2
1
skeletal muscle cell
2
1
1
1
1
skeletal muscle fiber
2
2
2
type I muscle cell
2
1
1
1
type II muscle cell
2
1
1
1
+ See 4 more…
cell line
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
SJCRH30
2
1
1
1
in vitro differentiated cells
myotube
1
1
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