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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
94
histone modifications
79
candidate regulatory elements
74
gene expression
69
accessible chromatin
65
target gene predictions
44
chromatin state
38
binding sites
6
variant allelic effects
1
representative DNase hypersensitivity sites
Date released
189
February, 2021
105
September, 2022
39
May, 2021
32
February, 2024
31
August, 2021
21
June, 2020
18
November, 2022
10
March, 2020
7
May, 2020
4
August, 2017
4
September, 2023
3
January, 2020
3
January, 2022
2
November, 2019
2
October, 2019
Available data
347
bed bed3+
75
tsv
40
bed bed9
24
csv
12
bigWig
5
bigBed bed9
Organism
470
Homo sapiens
Biosample type
2647
tissue
2343
cell line
1796
primary cell
470
in vitro differentiated cells
4
stem cell
Organ
50
connective tissue
30
embryo
26
epithelium
9
skin of body
7
liver
6
eye
6
penis
5
extraembryonic component
4
brain
4
nose
3
mammary gland
3
pancreas
2
lymphatic vessel
2
musculature of body
2
vasculature
1
adipose tissue
1
heart
1
kidney
Project
470
AMP
0
LungMap
Genome assembly (visualization)
387
hg19
65
GRCh38
BIOSAMPLE
TYPE
470 results
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Clear Filters
histone modifications
candidate regulatory elements
gene expression
accessible chromatin
target gene predictions
chromatin state
binding sites
variant allelic effects
representative DNase hypersensitivity sites
in vitro differentiated cells
neural progenitor cell
15
5
7
10
5
4
hematopoietic multipotent progenitor cell
1
19
1
1
10
10
1
adipocyte
1
4
1
4
6
6
1
embryonic stem cell
1
6
1
5
1
cardiomyocytes
11
mesenchymal stem cell
1
3
1
3
2
1
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
progenitor cell of endocrine pancreas
9
T-cell acute lymphoblastic leukemia
5
3
cardiomyocytes (cardiac muscle cell)
4
3
1
endodermal cell
4
2
2
mesendoderm
1
2
1
2
1
1
neuroblastoma cell line
6
2
neuronal stem cell
2
2
1
1
2
cardiac muscle cell
4
1
1
1
mesodermal cell
1
4
1
1
bipolar neuron
2
1
2
1
cardiac precursors (cardiac muscle cell)
4
1
1
dendritic cell
6
muscle cell
2
2
2
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
neural cell
3
1
1
smooth muscle cell
2
1
1
1
trophoblast cell
2
2
1
B cell
2
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
2
adipose-derived stem cell
1
2
1
colon adenocarcinoma
2
2
ectodermal cell
2
1
1
hepatocyte
2
1
1
islet precursor cell
2
1
1
neuron
2
1
1
olfactory neurosphere cell line
1
1
1
1
rhabdomyosarcoma cell
4
cardiac mesoderm primordium
1
1
1
esophageal adenocarcinoma
2
1
foreskin keratinocyte
1
1
1
foreskin melanocyte
1
1
1
hepatocyte(AFP)
3
iPS DF 4.7 Cell Line
1
1
1
mammary gland epithelial cell
1
1
1
pancreatic ductal adenocarcinoma
3
pancreatic ductal cell
3
BICR 31
1
1
CD4-positive helper T cell
1
1
CD8-Positive T-Lymphocytes
1
1
EAhy 926 cell
1
1
T-lymphoma cell line
1
1
Th1 cell
1
1
atypical teratoid rhabdoid tumor
1
1
cardiac myoblast
2
cardiovascular progenitor cell
2
chronic myelomonocytic leukemia
1
1
colorectal adenocarcinoma
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
differentiating adipose-derived stem cell
2
diffuse intrinsic pontine glioma
1
1
diffuse large B-cell lymphoma
1
1
endometrial stromal cell
1
1
endometrial stromal tumor
1
1
endometriosis
2
epidermal stem cell
1
1
erythroid progenitor cell
1
1
excitatory neuron
1
1
fibroblast
1
1
hippocampal neuron
1
1
lower motor neuron
1
1
lymphocyte of B lineage (iPSC)
2
medulloblastoma cell line
2
myocyte
1
1
myotube
1
1
natural killer cell
1
1
neuroepithelial stem cell
2
osteosarcoma
1
1
Adipose SGBS cell line (adipocyte)
1
Barrett's epithelial cell line
1
CD8-positive, alpha-beta T cell
1
Chondroid Chordoma
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Preadipose SGBS cell line (adipocyte)
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
T cell
1
Uveal Melanoma
1
cardiac fibroblast
1
cardiac muscle cell (pacemaker cell)
1
cardiac precursors
1
chondroblastoma
1
chronic lymphocytic leukemia
1
colon carcinoma
1
colonic adenoma cell
1
colorectal cancer
1
colorectal carcinoma
1
ecto neural progenitor cell
1
embryonic fibroblast
1
endometrioid carcinoma
1
endothelial cell
1
ependymoma
1
erythroid cell
1
fibroblast-like synoviocyte
1
hESC cell
1
head and neck squamous cell carcinoma BICR 16
1
head and neck squamous cell carcinoma BICR 6
1
hematopoietic stem cell
1
hepatocellular carcinoma
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
lymphoid progenitor cell
1
melanoma cell line
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
mid-neurogenesis radial glial cells
1
neuron cell of Hypothalamus (neuron)
1
radial glial cell
1
renal cell carcinoma
1
secretory cell
1
skeletal muscle myoblast
1
skin fibroblast
1
stem cell
1
white adipose cell
1
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