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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
888
histone modifications
781
binding sites
734
candidate regulatory elements
700
target gene predictions
446
accessible chromatin
433
chromatin state
402
gene expression
91
variant allelic effects
54
eQTL
52
differential activity
9
caQTL
5
hQTL
3
meQTL
3
sQTL
2
other
1
representative DNase hypersensitivity sites
Date released
1949
February, 2021
1134
September, 2022
358
May, 2021
351
February, 2024
226
June, 2020
99
October, 2022
95
May, 2020
82
August, 2021
64
March, 2023
50
January, 2022
47
May, 2022
27
January, 2020
27
November, 2022
24
March, 2020
16
August, 2017
16
February, 2020
9
August, 2018
9
October, 2019
5
February, 2023
5
September, 2023
4
November, 2019
3
November, 2020
2
March, 2024
1
July, 2020
1
June, 2021
Available data
3661
bed bed3+
405
tsv
383
bed bed9
157
bigWig
108
txt
34
bed bed9+
24
csv
16
bigBed narrowPeak
9
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
4559
Homo sapiens
Biosample type
tissue
2352
cell line
1777
primary cell
470
in vitro differentiated cells
4
stem cell
Organ
579
epithelium
293
connective tissue
214
bodily fluid
208
kidney
204
blood
178
embryo
169
skin of body
138
vasculature
125
pancreas
118
lung
117
brain
95
blood vessel
93
liver
79
mammary gland
68
uterus
64
bone element
63
prostate gland
62
lymph node
62
penis
58
musculature of body
45
extraembryonic component
38
intestine
35
eye
34
large intestine
31
heart
28
artery
22
vein
13
bronchus
12
lymphatic vessel
11
placenta
10
bone marrow
10
pituitary gland
9
gonad
8
limb
8
mouth
8
testis
7
spinal cord
6
esophagus
6
lymphoid tissue
5
adipose tissue
5
trachea
4
nose
2
stomach
1
adrenal gland
1
pericardium
1
thyroid gland
Project
4595
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
9
community
Genome assembly (visualization)
4096
hg19
801
GRCh38
1
hg18
biosample_type!
tissue
BIOSAMPLE
TYPE
4604 results
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Clear Filters
histone modifications
binding sites
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
variant allelic effects
eQTL
differential activity
caQTL
hQTL
meQTL
sQTL
other
representative DNase hypersensitivity sites
cell line
HeLa-S3
1
5
55
3
A549
1
2
21
19
1
18
H1-hESC
1
2
1
39
1
1
8
K562
1
2
7
23
1
7
MCF-7
2
3
9
6
1
5
+ See 765 more…
primary cell
monocyte
86
1
1
17
15
4
2
1
1
common myeloid progenitor, CD34-positive
27
14
13
CD8-positive, alpha-beta T cell
30
7
3
2
1
3
B cell
14
10
2
8
2
CD4-positive, alpha-beta memory T cell
14
9
9
+ See 322 more…
in vitro differentiated cells
neural progenitor cell
15
5
5
10
4
7
hematopoietic multipotent progenitor cell
1
1
19
10
1
10
1
adipocyte
1
1
4
6
4
6
1
embryonic stem cell
1
1
1
6
5
cardiomyocytes
11
+ See 121 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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