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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
178
candidate regulatory elements
131
gene expression
88
target gene predictions
87
chromatin state
54
accessible chromatin
19
variant allelic effects
17
eQTL
9
binding sites
7
histone modifications
6
Fine-mapped variants
2
differential activity
Date released
249
September, 2022
211
February, 2021
34
August, 2021
22
May, 2020
18
January, 2020
16
June, 2020
14
February, 2020
11
March, 2020
4
January, 2022
3
February, 2024
3
May, 2021
2
August, 2017
2
March, 2024
2
October, 2022
2
September, 2018
1
April, 2019
1
January, 2018
1
May, 2019
1
November, 2022
Available data
355
bed bed3+
133
tsv
87
txt
85
bed bed9
38
bigWig
3
bigBed bed9
Organism
598
Homo sapiens
Biosample type
385
tissue
167
primary cell
44
cell line
2
in vitro differentiated cells
Organ
640
epithelium
509
kidney
466
brain
386
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
239
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
598
AMP
140
KPMP
3
ENCODE
0
community
Genome assembly (visualization)
453
hg19
125
GRCh38
2
hg18
BIOSAMPLE
TYPE
598 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
variant allelic effects
eQTL
binding sites
histone modifications
Fine-mapped variants
differential activity
tissue
kidney
29
7
14
16
10
1
1
1
2
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
left kidney
18
9
9
+ See 23 more…
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
glomerular visceral epithelial cell
2
5
1
1
2
kidney tubule cell
3
1
2
2
2
kidney glomerular epithelial cell
2
1
1
1
2
1
+ See 34 more…
cell line
HEK293
3
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
G401
2
1
1
+ See 9 more…
in vitro differentiated cells
renal cell carcinoma
1
white adipose cell
1
See all biosamples
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