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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
111
accessible chromatin
100
candidate regulatory elements
63
target gene predictions
43
binding sites
38
variant allelic effects
28
histone modifications
3
chromatin state
2
caQTL
2
eQTL
Date released
111
February, 2021
100
September, 2022
58
February, 2024
24
June, 2020
17
May, 2021
15
November, 2022
12
January, 2020
12
May, 2020
11
August, 2021
11
February, 2023
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2020
2
May, 2022
1
November, 2019
Available data
393
bed bed3+
169
tsv
81
bigWig
78
txt
50
bed bed9
14
bigBed narrowPeak
6
csv
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
390
Homo sapiens
Biosample type
288
primary cell
54
tissue
31
cell line
17
in vitro differentiated cells
Organ
390
epithelium
309
brain
306
kidney
274
connective tissue
270
musculature of body
227
lung
209
intestine
190
bodily fluid
181
blood
176
embryo
175
limb
163
heart
155
skin of body
154
vasculature
131
large intestine
118
blood vessel
118
pancreas
109
extraembryonic component
96
liver
94
eye
84
stomach
74
uterus
67
bone element
67
mammary gland
63
prostate gland
60
small intestine
54
lymph node
54
penis
54
placenta
51
ureter
49
adipose tissue
47
adrenal gland
46
artery
37
thymus
35
gonad
29
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
vein
15
ovary
15
skeleton
15
thyroid gland
14
nerve
13
mouth
11
bronchus
11
pituitary gland
10
lymphatic vessel
9
breast
8
bone marrow
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
390
AMP
127
ENCODE
20
T1D
7
LungMap
Genome assembly (visualization)
389
hg19
48
GRCh38
files.file_type!
bam
BIOSAMPLE
TYPE
390 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
binding sites
variant allelic effects
histone modifications
chromatin state
caQTL
eQTL
primary cell
hepatocyte
7
1
2
1
2
4
endothelial cell of umbilical vein
2
6
4
2
1
foreskin keratinocyte
11
4
endothelial cell
4
2
2
1
2
1
keratinocyte
3
3
1
1
2
1
+ See 63 more…
tissue
pigmented layer of retina
20
breast epithelium
1
5
3
esophagus squamous epithelium
1
6
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 12 more…
cell line
EndoC_BH1
8
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
colon epithelial cell
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
2
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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