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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1215
target gene predictions
977
histone modifications
817
binding sites
503
gene expression
384
accessible chromatin
166
eQTL
135
variant allelic effects
75
chromatin state
74
Fine-mapped variants
48
differential activity
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
2576
February, 2021
1674
September, 2022
371
May, 2021
339
February, 2024
289
June, 2020
128
March, 2020
103
August, 2021
102
January, 2022
99
May, 2020
99
October, 2022
64
February, 2020
61
March, 2023
42
May, 2022
35
August, 2017
33
November, 2022
30
March, 2024
18
January, 2020
12
February, 2023
9
August, 2018
5
September, 2023
2
January, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
November, 2019
1
November, 2020
Available data
5510
bed bed3+
bed bed9
617
tsv
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
6095
Homo sapiens
Biosample type
2160
cell line
2043
tissue
1472
primary cell
418
in vitro differentiated cells
4
stem cell
Organ
507
epithelium
400
kidney
379
brain
324
connective tissue
285
musculature of body
229
lung
215
intestine
193
bodily fluid
188
pancreas
186
embryo
184
blood
184
heart
180
limb
168
vasculature
160
skin of body
135
blood vessel
135
large intestine
118
liver
110
extraembryonic component
87
stomach
77
uterus
76
adipose tissue
67
mammary gland
65
prostate gland
64
bone element
64
eye
61
small intestine
55
placenta
54
artery
54
lymph node
54
penis
49
adrenal gland
48
ureter
40
gonad
37
thymus
35
spinal cord
34
esophagus
27
spleen
22
testis
19
lymphoid tissue
19
nerve
18
vein
17
ovary
17
thyroid gland
15
mouth
13
pituitary gland
11
breast
11
bronchus
10
lymphatic vessel
9
bone marrow
8
tongue
8
urinary bladder
8
vagina
7
skeleton
5
trachea
3
nose
1
pericardium
Project
6098
AMP
281
KPMP
111
ENCODE
32
T1D
9
community
5
ITG
Genome assembly (visualization)
5414
hg19
513
GRCh38
4
hg18
files.file_type!
bigWig
bed bed9
BIOSAMPLE
TYPE
6098 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
gene expression
accessible chromatin
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
differential activity
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
2
8
1
A549
21
19
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
+ See 765 more…
tissue
stomach
40
21
1
1
3
1
heart
37
20
1
1
3
2
2
kidney
29
14
2
1
7
1
1
1
brain
29
16
3
1
1
1
2
1
lung
33
17
1
1
+ See 241 more…
primary cell
monocyte
1
86
1
15
2
4
2
1
1
CD8-positive, alpha-beta T cell
7
3
30
3
1
common myeloid progenitor, CD34-positive
27
14
CD14-positive monocyte
8
19
B cell
14
10
2
+ See 311 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
7
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
1
1
3
4
cardiomyocytes
11
embryonic stem cell
1
1
1
6
+ See 120 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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