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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1216
target gene predictions
834
candidate regulatory elements
622
accessible chromatin
136
histone modifications
122
variant allelic effects
99
binding sites
40
chromatin state
11
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
variant to gene
1
pQTL
1
sQTL
Date released
February, 2021
1678
September, 2022
292
February, 2024
288
June, 2020
285
May, 2021
135
May, 2020
99
October, 2022
66
January, 2020
51
August, 2021
45
March, 2020
41
November, 2022
34
August, 2017
30
February, 2023
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
3101
bed bed3+
869
bed bed9
439
tsv
263
bigWig
40
bigBed bed9
34
bed bed9+
25
txt
24
csv
13
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
3056
Homo sapiens
Biosample type
1239
tissue
850
primary cell
822
cell line
185
in vitro differentiated cells
4
stem cell
Organ
282
epithelium
211
kidney
200
brain
188
connective tissue
179
musculature of body
157
lung
138
intestine
123
embryo
117
heart
117
limb
116
bodily fluid
111
blood
109
vasculature
97
pancreas
87
skin of body
85
large intestine
84
blood vessel
77
eye
76
extraembryonic component
74
liver
64
uterus
55
stomach
42
small intestine
39
mammary gland
36
placenta
35
adipose tissue
35
bone element
34
prostate gland
33
adrenal gland
33
ureter
32
artery
27
lymph node
26
penis
26
thymus
23
gonad
20
spinal cord
19
esophagus
16
spleen
13
lymphoid tissue
11
nerve
11
ovary
11
testis
11
thyroid gland
10
pituitary gland
10
vein
9
mouth
6
breast
6
bronchus
6
skeleton
6
urinary bladder
5
lymphatic vessel
5
tongue
4
vagina
3
bone marrow
3
nose
1
trachea
Project
3101
AMP
333
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
3095
hg19
453
GRCh38
1
hg18
month_released!
February, 2021
BIOSAMPLE
TYPE
3101 results
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Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
histone modifications
variant allelic effects
binding sites
chromatin state
caQTL
eQTL
hQTL
meQTL
other
variant to gene
pQTL
sQTL
tissue
heart
20
19
5
2
stomach
21
19
3
kidney
14
14
10
1
1
brain
16
16
2
1
muscle of arm
16
16
1
1
+ See 141 more…
primary cell
monocyte
1
17
84
1
1
CD8-positive, alpha-beta T cell
3
2
30
common myeloid progenitor, CD34-positive
14
13
CD14-positive monocyte
19
4
B cell
10
9
2
+ See 201 more…
cell line
HeLa-S3
55
3
1
H1-hESC
39
1
1
1
A549
19
18
1
1
K562
23
6
1
1
1
HFFc6
19
+ See 261 more…
in vitro differentiated cells
neural progenitor cell
5
4
10
13
hematopoietic multipotent progenitor cell
10
10
1
adipocyte
6
2
4
4
dendritic cell
6
embryonic stem cell
1
5
+ See 50 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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