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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
21
candidate regulatory elements
21
gene expression
20
accessible chromatin
16
chromatin state
16
target gene predictions
14
histone modifications
13
binding sites
8
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
43
September, 2022
26
February, 2024
25
February, 2021
10
August, 2021
10
March, 2020
5
June, 2020
4
March, 2023
3
August, 2017
3
January, 2020
3
May, 2020
May, 2021
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
90
bed bed3+
25
tsv
19
bigWig
13
bed bed9
1
bam
1
bigBed bed9
Organism
141
Homo sapiens
Biosample type
57
primary cell
57
tissue
27
cell line
in vitro differentiated cells
Organ
580
epithelium
508
kidney
451
brain
357
musculature of body
324
connective tissue
295
lung
264
intestine
241
heart
241
limb
217
vasculature
214
bodily fluid
203
blood
201
pancreas
180
skin of body
179
embryo
176
blood vessel
163
large intestine
141
liver
136
extraembryonic component
108
stomach
99
eye
86
bone element
85
adipose tissue
79
small intestine
79
uterus
76
mammary gland
76
prostate gland
70
placenta
68
artery
64
ureter
61
adrenal gland
61
lymph node
57
penis
47
gonad
47
thymus
42
spinal cord
41
esophagus
33
spleen
26
testis
25
nerve
24
lymphoid tissue
22
vein
20
ovary
20
thyroid gland
19
mouth
18
skeleton
13
bronchus
12
breast
10
bone marrow
10
lymphatic vessel
10
tongue
10
urinary bladder
10
vagina
5
trachea
3
pituitary gland
1
pericardium
Project
141
AMP
5
ENCODE
Genome assembly (visualization)
112
hg19
54
GRCh38
2
hg18
month_released!
May, 2021
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
141 results
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Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
chromatin state
target gene predictions
histone modifications
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
primary cell
hepatocyte
1
13
7
1
1
4
1
2
endothelial cell of hepatic sinusoid
4
4
6
hepatic stellate cell
1
1
2
1
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
tissue
liver
13
1
4
9
9
2
1
7
1
1
right lobe of liver
2
1
1
1
1
3
cell line
HepG2
2
2
2
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
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