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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
candidate regulatory elements
20
accessible chromatin
20
gene expression
16
chromatin state
16
target gene predictions
14
histone modifications
13
binding sites
7
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
43
September, 2022
26
February, 2024
25
February, 2021
10
August, 2021
10
March, 2020
5
June, 2020
4
March, 2023
3
August, 2017
3
January, 2020
3
May, 2020
May, 2021
February, 2020
2
May, 2022
2
May, 2024
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
92
bed bed3+
23
tsv
19
bigWig
13
bed bed9
1
bam
1
bigBed bed9
Organism
141
Homo sapiens
Biosample type
59
primary cell
55
tissue
27
cell line
in vitro differentiated cells
Organ
581
epithelium
499
kidney
433
brain
351
musculature of body
323
connective tissue
295
lung
264
intestine
235
limb
232
heart
215
vasculature
214
bodily fluid
203
blood
199
pancreas
180
skin of body
179
embryo
171
blood vessel
163
large intestine
141
liver
136
extraembryonic component
108
stomach
97
eye
86
bone element
80
adipose tissue
79
small intestine
79
uterus
76
mammary gland
76
prostate gland
70
placenta
64
artery
64
ureter
61
adrenal gland
61
lymph node
57
penis
47
gonad
47
thymus
41
esophagus
41
spinal cord
33
spleen
26
testis
24
lymphoid tissue
22
nerve
22
vein
20
ovary
20
thyroid gland
19
mouth
18
skeleton
13
bronchus
13
lymphatic vessel
12
breast
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
3
pituitary gland
Project
141
AMP
5
ENCODE
Genome assembly (visualization)
113
hg19
55
GRCh38
2
hg18
month_released!
May, 2021
February, 2020
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
141 results
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Clear Filters
candidate regulatory elements
accessible chromatin
gene expression
chromatin state
target gene predictions
histone modifications
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
primary cell
hepatocyte
2
7
13
1
1
4
1
2
endothelial cell of hepatic sinusoid
4
4
6
hepatic stellate cell
2
2
1
1
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
tissue
liver
13
4
9
9
2
1
7
1
1
right lobe of liver
2
1
1
1
3
cell line
HepG2
2
2
2
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
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