Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
36
accessible chromatin
31
differential activity
30
gene expression
24
candidate regulatory elements
20
target gene predictions
17
chromatin state
15
eQTL
11
variant allelic effects
6
histone modifications
5
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
45
March, 2023
44
September, 2022
May, 2021
31
February, 2021
25
February, 2024
9
March, 2020
8
August, 2021
7
August, 2018
6
May, 2020
6
October, 2019
4
January, 2020
4
January, 2022
4
June, 2020
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
106
bed bed3+
60
tsv
36
bigWig
14
bigBed narrowPeak
13
bed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
204
Homo sapiens
Biosample type
109
tissue
76
primary cell
16
cell line
3
in vitro differentiated cells
Organ
604
epithelium
509
kidney
455
brain
368
connective tissue
358
musculature of body
295
lung
264
intestine
241
heart
241
limb
219
vasculature
214
bodily fluid
206
embryo
204
pancreas
203
blood
189
skin of body
176
blood vessel
163
large intestine
148
liver
140
extraembryonic component
108
stomach
105
eye
86
adipose tissue
86
bone element
79
mammary gland
79
small intestine
79
uterus
76
prostate gland
70
placenta
68
artery
64
ureter
63
penis
61
adrenal gland
61
lymph node
47
gonad
47
thymus
42
spinal cord
41
esophagus
33
spleen
26
testis
25
nerve
24
lymphoid tissue
22
vein
20
ovary
20
thyroid gland
19
mouth
18
skeleton
13
bronchus
12
breast
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
204
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
133
hg19
43
GRCh38
month_released!
May, 2021
August, 2022
BIOSAMPLE
TYPE
204 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
differential activity
gene expression
candidate regulatory elements
target gene predictions
chromatin state
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
sQTL
variant to gene
tissue
islet of Langerhans
5
9
1
3
13
1
1
2
2
2
2
body of pancreas
2
8
4
4
1
1
3
pancreas
5
5
4
3
1
1
1
1
endocrine pancreas
7
4
4
pancreatic ductal cell
2
+ See 6 more…
primary cell
pancreatic ductal cell
3
3
2
1
2
1
pancreatic beta cell
4
3
2
1
1
pancreatic alpha cell
3
3
2
1
1
pancreatic delta cell
2
3
2
1
1
pancreatic acinar cell
2
3
2
1
+ See 7 more…
cell line
EndoC_BH1
1
1
1
1
Panc1
2
1
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download