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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
971
histone modifications
839
candidate regulatory elements
817
binding sites
628
accessible chromatin
512
gene expression
384
target gene predictions
166
eQTL
139
variant allelic effects
106
chromatin state
74
Fine-mapped variants
48
differential activity
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
2590
February, 2021
September, 2022
389
May, 2021
377
February, 2024
289
June, 2020
155
May, 2020
128
March, 2020
123
August, 2021
106
January, 2022
99
October, 2022
89
January, 2020
64
February, 2020
61
March, 2023
49
May, 2022
44
November, 2022
35
August, 2017
31
February, 2023
30
March, 2024
14
November, 2019
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
5
September, 2023
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
3823
bed bed3+
617
tsv
264
bigWig
108
txt
35
bigBed bed9
34
bed bed9+
31
bed bed9
24
csv
15
bigBed narrowPeak
1
bam
Organism
4670
Homo sapiens
Biosample type
1801
cell line
1283
primary cell
1265
tissue
363
in vitro differentiated cells
4
stem cell
Organ
482
epithelium
286
brain
284
kidney
262
connective tissue
187
pancreas
159
musculature of body
145
vasculature
143
bodily fluid
138
blood
135
heart
132
embryo
117
blood vessel
106
intestine
106
limb
105
liver
92
skin of body
89
lung
78
eye
70
large intestine
69
uterus
65
adipose tissue
49
artery
44
bone element
44
extraembryonic component
41
stomach
39
mammary gland
39
prostate gland
38
lymph node
34
penis
25
ureter
24
gonad
23
placenta
23
small intestine
21
adrenal gland
20
esophagus
19
spinal cord
17
vein
16
nerve
16
spleen
15
thymus
14
testis
13
pituitary gland
9
lymphoid tissue
9
ovary
9
skeleton
9
thyroid gland
7
bone marrow
7
breast
7
bronchus
7
mouth
6
lymphatic vessel
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
4717
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
4024
hg19
683
GRCh38
4
hg18
month_released!
October, 2019
September, 2022
BIOSAMPLE
TYPE
4717 results
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table-tab-icon
Clear Filters
histone modifications
candidate regulatory elements
binding sites
accessible chromatin
gene expression
target gene predictions
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
differential activity
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
cell line
HeLa-S3
2
1
52
H1-hESC
1
2
1
8
38
K562
1
1
2
1
17
1
EndoC_BH1
1
1
8
8
1
1
1
breast cancer cell
11
9
+ See 746 more…
primary cell
monocyte
86
1
17
15
1
4
2
1
1
CD8-positive, alpha-beta T cell
30
7
2
3
3
1
hepatocyte
4
1
7
13
1
2
endothelial cell
1
2
4
9
1
2
2
epithelial cell of proximal tubule
1
1
1
16
1
+ See 311 more…
tissue
islet of Langerhans
1
2
5
11
1
13
1
3
2
2
2
kidney
2
15
1
10
7
1
1
2
heart
1
18
1
5
3
1
2
2
retina
1
3
1
23
1
1
1
stomach
1
21
3
1
2
1
+ See 256 more…
in vitro differentiated cells
neural progenitor cell
15
1
10
7
1
adipocyte
1
2
1
3
1
4
4
embryonic stem cell
1
1
6
1
5
hematopoietic multipotent progenitor cell
1
9
1
1
1
cardiomyocytes
11
+ See 118 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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