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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1488
candidate regulatory elements
1108
target gene predictions
963
histone modifications
806
binding sites
613
accessible chromatin
488
gene expression
157
eQTL
126
variant allelic effects
66
chromatin state
65
Fine-mapped variants
48
differential activity
9
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
2471
February, 2021
1497
September, 2022
374
May, 2021
366
February, 2024
274
June, 2020
142
May, 2020
115
August, 2021
111
March, 2020
100
January, 2022
98
October, 2022
72
January, 2020
61
March, 2023
53
February, 2020
49
May, 2022
44
November, 2022
31
August, 2017
28
February, 2023
27
March, 2024
10
November, 2019
9
August, 2018
8
October, 2019
5
September, 2023
3
November, 2020
3
September, 2018
2
January, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5138
bed bed3+
bed bed9
585
tsv
261
bigWig
108
txt
34
bed bed9+
30
bigBed bed9
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5912
Homo sapiens
Biosample type
2125
cell line
1809
tissue
1591
primary cell
429
in vitro differentiated cells
4
stem cell
Organ
588
epithelium
432
kidney
400
brain
343
connective tissue
293
musculature of body
229
lung
224
pancreas
intestine
heart
194
limb
193
bodily fluid
190
vasculature
186
embryo
184
blood
160
skin of body
152
blood vessel
137
liver
135
large intestine
110
extraembryonic component
96
eye
87
stomach
81
adipose tissue
77
uterus
72
bone element
67
mammary gland
65
prostate gland
62
artery
61
small intestine
55
placenta
54
lymph node
54
penis
51
ureter
49
adrenal gland
40
gonad
37
thymus
35
spinal cord
34
esophagus
28
spleen
22
testis
21
nerve
19
lymphoid tissue
19
vein
17
ovary
17
thyroid gland
15
mouth
15
skeleton
13
pituitary gland
11
breast
11
bronchus
10
lymphatic vessel
9
bone marrow
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
5959
AMP
304
ENCODE
281
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
5298
hg19
629
GRCh38
4
hg18
organ_slims!
heart
intestine
files.file_type!
bed bed9
BIOSAMPLE
TYPE
5959 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
gene expression
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
differential activity
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
2
1
8
A549
21
19
1
2
1
K562
7
23
1
2
1
1
EndoC_BH1
1
1
1
8
8
1
1
+ See 756 more…
tissue
stomach
40
21
1
3
1
1
kidney
29
14
2
1
10
7
1
1
brain
29
16
3
1
2
1
2
1
lung
33
17
1
1
muscle of arm
33
16
1
1
+ See 226 more…
primary cell
monocyte
1
86
1
17
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
3
30
2
3
1
common myeloid progenitor, CD34-positive
27
14
hepatocyte
1
2
4
1
7
13
2
B cell
14
10
2
2
+ See 314 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
1
4
1
4
cardiomyocytes
11
embryonic stem cell
1
1
1
6
+ See 120 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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