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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
115
candidate regulatory elements
82
target gene predictions
74
chromatin state
72
accessible chromatin
53
gene expression
45
binding sites
30
histone modifications
25
variant allelic effects
23
eQTL
15
Fine-mapped variants
12
differential activity
4
caQTL
Date released
174
September, 2022
141
February, 2021
33
February, 2024
23
June, 2020
21
January, 2020
21
March, 2020
21
May, 2020
19
May, 2021
14
February, 2020
13
October, 2022
11
March, 2023
9
January, 2022
8
August, 2017
8
August, 2021
7
November, 2022
4
February, 2023
4
October, 2019
3
May, 2022
3
November, 2019
3
November, 2020
2
September, 2018
2
September, 2023
1
August, 2018
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2019
Available data
381
bed bed3+
75
tsv
66
bed bed9
37
bigWig
10
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
550
Homo sapiens
Biosample type
287
primary cell
175
tissue
50
in vitro differentiated cells
37
cell line
1
stem cell
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
550
AMP
53
ENCODE
35
KPMP
5
LungMap
4
ITG
2
T1D
Genome assembly (visualization)
470
hg19
140
GRCh38
2
hg18
BIOSAMPLE
TYPE
550 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
differential activity
caQTL
primary cell
endothelial cell of umbilical vein
6
4
5
2
2
1
osteoblast
2
2
1
5
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
endothelial cell of hepatic sinusoid
4
4
6
+ See 49 more…
tissue
adipose tissue
7
8
6
2
3
1
1
4
coronary artery
3
3
3
3
1
2
2
3
1
subcutaneous adipose tissue
2
1
2
5
1
6
3
1
tibial artery
3
2
3
3
1
2
2
3
omental fat pad
5
2
2
2
2
2
3
+ See 15 more…
in vitro differentiated cells
adipocyte
4
6
6
4
1
1
1
mesenchymal stem cell
3
3
2
1
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
smooth muscle cell of the coronary artery
1
1
1
1
foreskin fibroblast
1
1
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
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