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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
168
candidate regulatory elements
160
target gene predictions
100
chromatin state
59
histone modifications
52
accessible chromatin
36
Fine-mapped variants
29
binding sites
29
eQTL
29
gene expression
17
variant allelic effects
Date released
261
September, 2022
163
February, 2021
52
February, 2024
39
March, 2020
31
June, 2020
29
January, 2020
19
May, 2020
18
February, 2020
18
January, 2022
18
May, 2021
8
August, 2021
7
August, 2017
7
October, 2022
4
May, 2019
3
September, 2023
1
March, 2024
1
November, 2019
Available data
485
bed bed3+
93
bed bed9
77
tsv
21
bigWig
6
bigBed bed9
Organism
678
Homo sapiens
Biosample type
384
tissue
204
cell line
55
primary cell
34
in vitro differentiated cells
2
stem cell
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
679
AMP
2
ENCODE
Genome assembly (visualization)
626
hg19
230
GRCh38
BIOSAMPLE
TYPE
679 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
accessible chromatin
Fine-mapped variants
binding sites
eQTL
gene expression
variant allelic effects
tissue
brain
29
16
18
3
2
1
2
1
1
caudate nucleus
5
3
4
1
2
3
2
1
1
substantia nigra
5
2
3
1
3
3
1
cerebellum
3
2
2
1
1
3
2
2
chorionic villus
8
4
4
+ See 62 more…
cell line
H1-hESC
1
39
1
1
1
2
8
H9
7
8
1
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
+ See 28 more…
primary cell
trophoblast cell
7
5
4
1
1
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
cardiac fibroblast
3
2
+ See 6 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
+ See 6 more…
stem cell
H1-hESC
1
undifferentiated ESC (H9 cell line)
1
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